Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01512 ATGTCCAAGGGTTGTCTTGAAATACCAAAAATGTCATCATTTGAACGATGGTTTCCAGAAGATATTCAACGTCCGATTAGATTTCCATTTACAATAAATCAACAAAATAATCACCATAATAATGATAATCATGAAGACAATTCCAAACCACCCGTGAGGTTATTTCATTTCACAAAAGAGAATATTGCAAAACTAAAATTCAAAGCCAACTTAGAGGCTGCTGATACAAAGAACATATCTTCTTTGCAAGCAGTTCTCACTCACATTTGGCGATCTATTATACGTTCCAAGAATCTTGACCCAGAAAAAGAAGTAAATTTTGTGGTGTCTATAGGTATTAGACCAAGGTTGATTCCACCGTTGAACGTGGATTATTTTGGGAACGCTATGATAGCTCGCGACTTATTGGAAAACAATGGGCTTGGTAAAGGTGCTTCAAAAATGAACAAGTTGATTGCTTTACAATCTGATGAGAAGTTGAAAAATCACTATGAGAATTGGTTGAAAACACCGAGTTTTTTTAATGTTGGTAAGTATAGTGAAAAATTAGTGCTTGGTAGTTCACCTAGGTTTGATGTTTATGGTAATGACTTTGGTTGGGGAAAACCTGTGGCAGTTCGACATGGGGGTCAAAATAAAGAAAAGGGAGTTATTAGTGTGTTTGCAGGTGTAGAAGAAGGTAGTATGGACCTTGAATTGTGTTTTCCTTATGAAACTTTGGAGGCAATTTGTAATGATCCTGAGTTTATGAAAATATTTTGA 762 0.3543 MSKGCLEIPKMSSFERWFPEDIQRPIRFPFTINQQNNHHNNDNHEDNSKPPVRLFHFTKENIAKLKFKANLEAADTKNISSLQAVLTHIWRSIIRSKNLDPEKEVNFVVSIGIRPRLIPPLNVDYFGNAMIARDLLENNGLGKGASKMNKLIALQSDEKLKNHYENWLKTPSFFNVGKYSEKLVLGSSPRFDVYGNDFGWGKPVAVRHGGQNKEKGVISVFAGVEEGSMDLELCFPYETLEAICNDPEFMKIF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01512 253 Gene3D - 30 244 IPR023213 -
Trre15g01512 253 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 250 - -
Trre15g01512 253 Pfam Transferase family 55 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01512 Trre-Chr15 11892296 11893057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01512 52 253 Monolignol Biosynthesis Gene Families AT5G48930 26.168 1.66e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01512 - - psat:127075665 285.419