Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01509 ATGAATTCCATCCAAGTTCTCTCTACCACTACAATCAATACACCAAATCAAAAAACTTGTGATGACTCAAATGATCATACAATCCATCTAACACCATGGGATCTCCAATTACTTCCATATGGAGTCAACCAAGAGGGTCTTATTTTTCACCACCCTTTGAAACTAGATACATCAAATCAAATTGAACACCTTAAACACTCTCTTTCATCCACTCTTGAAATGTTTCCACCCTTTACAGGTCGTCTCAAAATCCAGGAACACGAAGATAATACTATCTCGTGTTTCATCACATGCAACAACGAAGGTTCACTTTTTGTCCATGTTGTAGCAGAAAACACTAGTGTTGATGACATTCTTGGATCCACTTATGTTCCTCAAATTCTCCACTCATTTTTTCCACTTAATGGTGTTAAAAACTACGAAGGGACATCCAATCCATTATTCGCTGTCCAAGTAACAGAGCTAGTTAACGGCATCTTCATTGGTTGCACAATTAATCATGTGGTTGCTGATGGTACGTCGATTTGGCAATTCATCAATTCATGGGCAAAAATCTCAAAGGGTTGTCTTGAAATGACTAGAATTCAATCATTTGAACGTTGGTTTCCAAATGGTATTCAACTTCCGATTAGATTTCCTTTCACAATAGAACAACAAAATAATCTCTATAGTAACGATAATCATAAAGAAGACAATCCCAATCCACTAGAGAGGTTATTTCATTTCCCAAAAGAGAATATTGCAAAACTAAAACTAAAAGCTAATTTAGAGGCTGGCACAAATAATATATCTTCTTTGCAAGCACTTTTAACTCACATTTGGAGATCTATTATACGTTCCAAAAATCCTAACCCAGAAGAAGAAGTGGATTTTGCGGTGCTTATAGGCATTAGACCAAGGTTGATTCCTCCTCTAAAAGAGGATTATTTTGGGAACGCTCTAATAGATTGTGTGGTAACCATGAAAGCTCGTGATTTGTTGGAAGACGGTGGCCTTGGTAAAGGTGCTTCCGAAATGAACAAGATGATTGCTTTGCACTCTGATGAGAAGTTGAAAAATGACTATGAGAATTGGTTGAAAATGCCGAGTTTTGTTAATGTTGGTGTAGAAGAAGGTAGTATGGATATTGAAGTGTGTTTTTCTTATGAAACTTTGGAGGCAATTTGTAATGATCCAGAGTTTATGGAGGTTGTGTCCAACTAA 1203 0.3674 MNSIQVLSTTTINTPNQKTCDDSNDHTIHLTPWDLQLLPYGVNQEGLIFHHPLKLDTSNQIEHLKHSLSSTLEMFPPFTGRLKIQEHEDNTISCFITCNNEGSLFVHVVAENTSVDDILGSTYVPQILHSFFPLNGVKNYEGTSNPLFAVQVTELVNGIFIGCTINHVVADGTSIWQFINSWAKISKGCLEMTRIQSFERWFPNGIQLPIRFPFTIEQQNNLYSNDNHKEDNPNPLERLFHFPKENIAKLKLKANLEAGTNNISSLQALLTHIWRSIIRSKNPNPEEEVDFAVLIGIRPRLIPPLKEDYFGNALIDCVVTMKARDLLEDGGLGKGASEMNKMIALHSDEKLKNDYENWLKMPSFVNVGVEEGSMDIEVCFSYETLEAICNDPEFMEVVSN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01509 400 Gene3D - 215 399 IPR023213 -
Trre15g01509 400 Pfam Transferase family 20 361 - -
Trre15g01509 400 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 365 - -
Trre15g01509 400 Gene3D - 2 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01509 Trre-Chr15 11862780 11864120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01509 47 328 Monolignol Biosynthesis Gene Families AT5G48930 28.231 1.06e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01509 - - psat:127075665 439.113