Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01455 ATGGGTATGGCTAAAGAGAATCAATTCCATGTTTTGGCTGTTGATGATAGTATCATTGATAGAATGTTGATTGAAAGGCTCCTCAAAACTTCTTCTTTTCAAGTTACTGCAGTGGATTCTGCTACTAAGGCTTTGAAATTTCTTGGTTTGGCTGAGGATGTTGCTTCAGAAATTCATCAGGATGTTGATGTAAATCTGATCATAACAGATTATTGTATGCCAGGGATGACAGGCTATGATCTGCTCAGAAAAATCAAGGAATCCAAATCTTTTAAAGACATACCGGTCGTGATAATGTCCTCGGAGAATGTTCCATCTAGAATAAACAGATGTTTGGAAGAGGGAGCTGAAGAATTCTTCTTGAAACCAGTTCAACAATCAGATGTAAACAAGTTGAGGCCTCATTTGCTGAAATCAAGAGTTAAGGAAGAGCAAGAACAACCTATTAACAACTAA 456 0.3728 MGMAKENQFHVLAVDDSIIDRMLIERLLKTSSFQVTAVDSATKALKFLGLAEDVASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLRPHLLKSRVKEEQEQPINN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01455 151 ProSiteProfiles Response regulatory domain profile. 10 137 IPR001789 GO:0000160
Trre15g01455 151 SMART REC_2 9 133 IPR001789 GO:0000160
Trre15g01455 151 Gene3D - 10 150 - -
Trre15g01455 151 SUPERFAMILY CheY-like 8 137 IPR011006 -
Trre15g01455 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 140 IPR045279 GO:0009736
Trre15g01455 151 CDD REC_typeA_ARR 11 132 - -
Trre15g01455 151 Pfam Response regulator receiver domain 11 129 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01455 Trre-Chr15 11386205 11387565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01455 1 149 Response Regulator Gene Family AT2G41310 64.331 8.13e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre15g01455 Response_reg 4.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01455 K14492 - gmx:100787436 260.766