LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g01439	ATGTCCTACAAAGCATTAAAAGAAGATTCCAAGATGTCCTATAAATCATTAGAAGAAGGTTTCAACCAAACTAATCAATCTCCTGAAAAGCCACCACCAATATGTATTGGCTTTTTTTATCTTCTTCTCATTGGCCTGTTTTATTACTTCATAATTCCATGCATTATGACGCCTTCGATTGAGTTCAACATAACTGAAGCTTCAATAACCCAATTCAACATCACAAGCAACAACATCTTATATTATAACTTCAACCTCAGCATTACAGTAAGAAATTTCGAAAACCGAGTACGTACTGATTTTGAAAGGAAGATCGATGCAATTCCTTCGTACAAAGGTAATCAATTAAATTCAGTAACTATGGAACCCTTTTCTCTAGGTAGTGAGAAGAAAATTATACTTCAGCCCATAGTGTTTGAAGGGAACAGCCTTATGGAATTGGATCGTAAACAACTTGTTGAGTATAATAAGGAGACAAAATTGGGAATTTACAACTTACATTTCGAATTATCTAAATATGTGCATTGTCCAAGTTTGAGAATTCCTTTGATTTCCAATGGTAAATTGGCACCTACTTTCAAAGTCGTCAAATGCTCTTATGAGTGGAAGTACTATGAGAACCAATGA	627	0.3429	MSYKALKEDSKMSYKSLEEGFNQTNQSPEKPPPICIGFFYLLLIGLFYYFIIPCIMTPSIEFNITEASITQFNITSNNILYYNFNLSITVRNFENRVRTDFERKIDAIPSYKGNQLNSVTMEPFSLGSEKKIILQPIVFEGNSLMELDRKQLVEYNKETKLGIYNLHFELSKYVHCPSLRIPLISNGKLAPTFKVVKCSYEWKYYENQ	208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g01439	208	PANTHER	OS05G0367900 PROTEIN	34	168	IPR044839	GO:0098542

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g01439	Trre-Chr15	11262085	11262711	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre15g01439	55	171	SNARE and Associated Proteins	AT1G32270	28.205	1.17e-11	60.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g01439	-		-	tpra:123886814	168.703