Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01434 ATGGCTACTCTTGTTACAATTAAATCATCTCCGATCGAAGATGCTGAGGCTCTCCAAAAGGCTTTTAAAGGATGGGGGACTGATGAGAAAAGTGTGATTACAATATTGGGTCATAGAAATGTTTATCAGAGACAACAAATCAGAAAATCTTATCAAGAAACATACAAAGAGGATCTCCTCAAACGCCTCGAATCTGAAATCTCGGGTGATTTTGAGAGAGCTGTGTACCGTTGGATGCTGGAACCTGCAGATCGCGACGCTGTTTTGGCCAATGTTGCCATTAAGGATGGAAACAAAGGTTACCATGTTATTATTGAAATTGTTAGTGTTCTTTCGCCTGAAGAAGTGTTAGCAATGCGTCGTGCTTATCATAATCGGTACAAGCATTCTTTAGAAGAAGATGTAGCTGCTCATACCTCTGGCCATCTTCGTCAGCTATTGGTTGGATTGGTAAGCTCATTTAGATATGGTGGTGATGAAATCAATCCAAAATTAGCAAAAACTGAAGCTGATATTCTTCATGAATCAATCAAAGAGAAAAAAGGAAACCCTGAAGAAGCCATTAGAATTCTTACTACAAGAAGCAAGACTCAGCTTTTGGCGACGTTTAATCGTTACAGAGATGACCATGGCATTTCCATAACTAAGAAGTTGCTGGATAATGCATCTGATGACTTTCACAAGGCATTGCACACCGCGATTCGATGCATCAATGACCATAAGAAATACTATGAAAAGATTCTGCGCGGTGCGCTGAAAAGGGTTGGAACGGATGAGGATGGACTGACTCGTGTGATTGTGACAAGAGCTGAGAAGGACTTGAAGGACATCAAAGAGCTGTATTATAAGAGAAACAGTGTTCACCTTGAAGATGCAGCGGCCAAAGAAATTTCAGGGGACTACAAAAAGTTCATACTTACCTTGTTGGGGAAGTAA 936 0.4071 MATLVTIKSSPIEDAEALQKAFKGWGTDEKSVITILGHRNVYQRQQIRKSYQETYKEDLLKRLESEISGDFERAVYRWMLEPADRDAVLANVAIKDGNKGYHVIIEIVSVLSPEEVLAMRRAYHNRYKHSLEEDVAAHTSGHLRQLLVGLVSSFRYGGDEINPKLAKTEADILHESIKEKKGNPEEAIRILTTRSKTQLLATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCINDHKKYYEKILRGALKRVGTDEDGLTRVIVTRAEKDLKDIKELYYKRNSVHLEDAAAKEISGDYKKFILTLLGK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01434 311 FunFam Annexin 1 80 - -
Trre15g01434 311 PANTHER ANNEXIN 11 308 - -
Trre15g01434 311 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Trre15g01434 311 PRINTS Annexin family signature 296 309 IPR001464 GO:0005509|GO:0005544
Trre15g01434 311 PRINTS Annexin family signature 23 45 IPR001464 GO:0005509|GO:0005544
Trre15g01434 311 PRINTS Annexin family signature 63 79 IPR001464 GO:0005509|GO:0005544
Trre15g01434 311 PRINTS Plant annexin signature 117 131 IPR009118 -
Trre15g01434 311 PRINTS Plant annexin signature 159 179 IPR009118 -
Trre15g01434 311 PRINTS Plant annexin signature 224 242 IPR009118 -
Trre15g01434 311 Gene3D Annexin 1 80 IPR037104 GO:0005509|GO:0005544
Trre15g01434 311 FunFam Annexin 81 151 - -
Trre15g01434 311 SUPERFAMILY Annexin 10 310 IPR037104 GO:0005509|GO:0005544
Trre15g01434 311 Pfam Annexin 246 308 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 Pfam Annexin 169 231 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 Pfam Annexin 14 75 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 Pfam Annexin 89 150 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 ProSiteProfiles Annexin repeat profile. 164 235 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 ProSiteProfiles Annexin repeat profile. 81 152 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 FunFam Annexin 240 311 - -
Trre15g01434 311 ProSiteProfiles Annexin repeat profile. 239 310 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 Gene3D Annexin 81 152 IPR037104 GO:0005509|GO:0005544
Trre15g01434 311 ProSiteProfiles Annexin repeat profile. 9 80 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 FunFam Annexin 164 238 - -
Trre15g01434 311 Gene3D Annexin 241 311 IPR037104 GO:0005509|GO:0005544
Trre15g01434 311 Gene3D Annexin 164 238 IPR037104 GO:0005509|GO:0005544
Trre15g01434 311 SMART annex3 181 233 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 SMART annex3 26 78 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 SMART annex3 256 308 IPR018502 GO:0005509|GO:0005544
Trre15g01434 311 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01434 Trre-Chr15 11223980 11228047 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01434 K17098 - gmx:100794511 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01434 15 11223980 11228047 Trre15g01434 15 11223980 11228047 ECH
Trre5g00396 5 2493920 2496018 Trre15g01434 15 11223980 11228047 PCT