Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01432 ATGGCATTCAATCAAGAATTAGAAGCTCTAACCCAAGCTTTCTCAGGACATGGTGTGGATGAGAAATCATTGACAACAATATTGGGAAAATGGGATCCTTTGGAGAGAGAGTCTTATAGGAAAAAGACATCAAATTTCTTCATTGAAGATCATGAACGCCAATTTCAAAGGTGGAATGATCATTGTGTTCGTCTTCTCAAACATGAGTTTGTGCGTTTTAAGAATGCAGTGGTGCTTTGGAGCATGCACCCTTGGGAAAGAGATGCTCGTTTAGCAAAAGAGGCCCTAAAGAAAGGCCCAAGTTCATATGGTGTGTTGATTGAGATTGCATGCACAAGATCTTCAGAAGAGCTTTTGGGAGCTAGGAAGGCATATCATTCCCTCTTTGACCACTCCATTGAAGAAGATGTTGCTTCTCACATTCATGGCATTGACAGAAAGCTCTTGGTTGCACTTGTGAGTGCCTATAGGTATGAAGGATCAAAGGTTAAAGATGACATTGCAAAATCAGAAGCCAAAACACTTTCCAATGCCATTAAGAATGATCAAAAGAAGCCTATTGTTGAGGATGATGAAGTAATAAGGATTTTGGCTACAAGAAGCAAGCCACATCTTCAAGCAGTTTACAAGCACTATAAAGAGATATCTGGCAAAAATCTTGAAGAGGATCTTAATGACTTAAGGTTTAAAGAGACTGTACTATGCCTTTGTACTCCACAAGTATATTTTAGTAAGGTTTTGGATGAAGCATTAAGAATTGATGTGGATAAGAATATTAAGAAATCACTTACTCGTGTGATTGTTACTAGAGCTGACATTGATATGAAGGAGATAAAAGCTGAGTATAATAACTTATATGGAGTTTCTTTGCCTCAAAAAATTGAAGAGACTGCTAAAGGGAACTATAAAGATTTCTTGCTAACCTTGATTGCTAGAGGAGGTTAA 945 0.3767 MAFNQELEALTQAFSGHGVDEKSLTTILGKWDPLERESYRKKTSNFFIEDHERQFQRWNDHCVRLLKHEFVRFKNAVVLWSMHPWERDARLAKEALKKGPSSYGVLIEIACTRSSEELLGARKAYHSLFDHSIEEDVASHIHGIDRKLLVALVSAYRYEGSKVKDDIAKSEAKTLSNAIKNDQKKPIVEDDEVIRILATRSKPHLQAVYKHYKEISGKNLEEDLNDLRFKETVLCLCTPQVYFSKVLDEALRIDVDKNIKKSLTRVIVTRADIDMKEIKAEYNNLYGVSLPQKIEETAKGNYKDFLLTLIARGG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01432 314 SUPERFAMILY Annexin 4 311 IPR037104 GO:0005509|GO:0005544
Trre15g01432 314 Gene3D Annexin 166 236 IPR037104 GO:0005509|GO:0005544
Trre15g01432 314 Gene3D Annexin 83 153 IPR037104 GO:0005509|GO:0005544
Trre15g01432 314 FunFam annexin D4 241 311 - -
Trre15g01432 314 Pfam Annexin 172 225 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 Pfam Annexin 261 309 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 FunFam Annexin 83 152 - -
Trre15g01432 314 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Trre15g01432 314 PRINTS Annexin family signature 281 296 IPR001464 GO:0005509|GO:0005544
Trre15g01432 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Trre15g01432 314 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Trre15g01432 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 PANTHER ANNEXIN 5 309 - -
Trre15g01432 314 SMART annex3 188 236 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 SMART annex3 260 309 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 SMART annex3 100 152 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 Gene3D Annexin 239 311 IPR037104 GO:0005509|GO:0005544
Trre15g01432 314 ProSiteProfiles Annexin repeat profile. 166 242 IPR018502 GO:0005509|GO:0005544
Trre15g01432 314 FunFam annexin D4 153 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01432 Trre-Chr15 11192144 11196526 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01432 K17098 - gmx:100796623 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01432 15 11192144 11196526 Trre15g01432 15 11192144 11196526 ECH