Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01430 ATGCATTTATTAATTGTACTCAAGATTCTGATTGTCCAAAAAATCGGTGCTCATATAATGCTACGGAAACAAAGTGTCATGCGTTTAAAACTTTGCTTTTTCCCGATCCCGCACCCATCTCACAAGATCGCTCAAGGCAAAAAAATAAACCCAAGGTATAGAGAGTGTATAAAGTATCAAGCTATCGGAATCGGTGGTCATGCTCTCGACGACAACAACGAGTTTATGTATGTGGGAATGAAGAAAATTTGGAATTGTGAAAATGCTTTGTAA 273 0.3773 MHLLIVLKILIVQKIGAHIMLRKQSVMRLKLCFFPIPHPSHKIAQGKKINPRYRECIKYQAIGIGGHALDDNNEFMYVGMKKIWNCENAL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01430 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 53 90 IPR006456 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01430 52 81 ZF-HD Transcription Factor Family AT5G65410 56.667 1.10e-06 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Trre15g01430 ZF-HD_dimer 4.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01430 - - jre:108991267 53.1434