Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01426 ATGGTGAAGGAAACTGCTTACTATGATACATTAGGTGTTACTGTTGATGCATCTGCTGCAGATATCAAGAAAGCTTATTATGTCAAGGCAAGAATAGTTCACCCTGATAAAAATCCCGGGGACCCTAAGGCTGCAGAAAATTTTCAGCTGCTTGGCGAGGCCTACCAGGTTTTAAGCGATCCTGAGAAGCGTGAAGCATATGACAGGAATGGAAAGGCAGGAGTGTCGCAAGATTCAATGATGGACCCTACAACTGTATTTGGAATGCTTTTCGGAAGTGATTCTTTTGAAGAATATATTGGAAAACTTGCACTTGCTAATTTAGCATCTATAGAAGTTGAGGAAGATGCATCATCGGATATTCAAGTTCGTCTGCAGAGAATTCAAGAAAGGATGAAAGCATGGCAGAAGGAAAGAGAACAGAAGCTGATAACAATTCTGAAAGACCGTCTGCAACCATTTGTTGATGGTAGAGAAGATGAATTTACAGCATGGGGAAATTCTGAAGCTAGTACTCTTTCAAAAGCCGCTTTTGGAGAGGCCATGCTACATACAATTGGTTATATCTACACACGAAAAGCAGCAAAAGAACTAGGAAAGGATATCCGGTTCATGAACGTTCCTTTCTTGGCAGAGTGGGTACGAGACAAAGGACACCGTATAAAGTCACAAGTGACGGCAGCGTCAGGAGCTGTGTCCCTAATTCAACTACAAGAAGAGCTCAAGAAGCTAAATCAAGGAGAAAATAAAGAAGAAAACATAATGAAAGCTCTTGAAGATAAGAAGGATGCGATGATTAATTCCTTATGGCAGATAAATGTGATTGATATTGAATCTACTCTGTCACATGTTTGTCAAGCAGTTCTTAAGGATCCTAGTGTGTCCAAAGATGTTCTGAAGGCTCGGGCCAAAGCATTGAAAATGTTAGGAACCATCTTTCAAGGTGCTAAGGTTGCTTTTCGGAGAGAGAACAGTCTACGCCAAGAAAGTGACAAACTAAATGATGCTGGTTCCTCATCATAG 1023 0.4096 MVKETAYYDTLGVTVDASAADIKKAYYVKARIVHPDKNPGDPKAAENFQLLGEAYQVLSDPEKREAYDRNGKAGVSQDSMMDPTTVFGMLFGSDSFEEYIGKLALANLASIEVEEDASSDIQVRLQRIQERMKAWQKEREQKLITILKDRLQPFVDGREDEFTAWGNSEASTLSKAAFGEAMLHTIGYIYTRKAAKELGKDIRFMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQLQEELKKLNQGENKEENIMKALEDKKDAMINSLWQINVIDIESTLSHVCQAVLKDPSVSKDVLKARAKALKMLGTIFQGAKVAFRRENSLRQESDKLNDAGSSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01426 340 Pfam X-domain of DnaJ-containing 136 323 IPR026894 -
Trre15g01426 340 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Trre15g01426 340 Pfam DnaJ domain 7 68 IPR001623 -
Trre15g01426 340 CDD DnaJ 7 60 IPR001623 -
Trre15g01426 340 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 331 - -
Trre15g01426 340 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Trre15g01426 340 Gene3D DnaJ domain 1 87 IPR036869 -
Trre15g01426 340 Coils Coil 118 145 - -
Trre15g01426 340 SUPERFAMILY Chaperone J-domain 2 98 IPR036869 -
Trre15g01426 340 PRINTS DnaJ domain signature 63 82 IPR001623 -
Trre15g01426 340 PRINTS DnaJ domain signature 8 26 IPR001623 -
Trre15g01426 340 PRINTS DnaJ domain signature 26 41 IPR001623 -
Trre15g01426 340 PRINTS DnaJ domain signature 43 63 IPR001623 -
Trre15g01426 340 SMART dnaj_3 5 63 IPR001623 -
Trre15g01426 340 Coils Coil 234 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01426 Trre-Chr15 11130561 11136108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01426 7 68 Miscellaneous Gene Families AT1G16680 50.000 1.06e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01426 - - gmx:100787075 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01426 15 11130561 11136108 Trre15g01426 15 11130561 11136108 ECH