Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre15g01417 | ATGTACATCAAGGAAATTTGCTTGGAAGGTTTCAAATCCTACGCAACTCGAACTGTTGTTCCTGGATTTGATCGTTTCTTCAACGCTATAACTGGTTTGAATGGTTCTGGTAAATCGAACATTCTCGATTCGATTTGTTTTGTTCTTGGAATCACTAATTTGCAGCAGGTTCGTGCTTCGAATCTTCAAGAACTTGTGTATAAGCAAGGTCAAGCGGGAATTACTAAGGCCACTGTTTCAATTGTGTTTGATAATTCTGAAAGAAGCCGTAGTCCTCTTGGATATGAAGGCCATTCCGAGATTACTGTTACAAGACAGATTGTGGTCGGAGGGAGGAACAAATATTTGATAAATGGGAAACTTGCACAGCCTAGTCAAGTCCAAAACCTTTTCCATTCCGTGCAACTAAATGTTAACAATCCGCATTTTCTTATAATGCAAGGGCGGATTACTAAGGTTTTAAATATGAAACCTCCAGAGATATTGTCTATGCTCGAGGAAGCTGCTGGGACAAGAATGTATGAGACAAAGAAAGAGGCTGCTCTAAAAACTCTTGAGAAGAAGCAGAGTAAGGTTGATGAGATCAACAAGCTTCTTGATCAGGAGATACTTCCAGCTTTGGAGAAGTTAAGGAAAGAAAGGACCCAGTACATGCAATGGGCTAATTGCAACGCTGAGTTGGATAGACTGAGAAGATTCTGTGTTGCTTTTGAGTATGTTCAAGCGGAGTCTATTAAAGACAATGCTACTTCTGAGGTGGAACAAGTAAAAGCCAAGATAGCTGAGATTGACGACATTGCTAAGACAACTATGGTGGATGTAAAGGAAATGGAGACTAAAATAGCTCAGTTGACTGCCGAGAAGGAAGCAAGCATGGGTGGGGAAATGAAATCTCTGTCAGAGAAGGTTGATGCACTTTCCCAGAGTCTTGTGAAGGAAACGTCTGTACTAAATAATAAAGAAGACACTCTGAGGAGTGAAGAAGTCAACAAAGAAAAAATTGTTAAAAATATTGAAGAATTGAAGCAATCTGTAGAAGAGAAGGCATCTGCCATTAAAAAGGCTGAAGAAGGAGCTGCTGATTTGAAAAATAGAGTTGAGGAGCTCTCAAAAAGCCTTGAGGAGCATGAAAAGGAATACCAGGGCGTTTTAGCTGGCAAGAGCAGTGGTAATGAGGAGAAATGCTTAGAAGATCAACTAGGCGATGCAAAGATAGCAGTCGGAAGTGCTGAAACAGAATTAAAACAGCTGAAAACCAAAATTAGCCATTGTGAGAAGGAACTGAAAGAGAAAAAAATTCAATTAAGGTCAAAACAGGATGAAGCTACTTCTGTGGAAAATGAGCTCAGAGCTAGAAGGAAGGATGTTGAAAATATCAAAACAGGATTGGAGTCTCTTCCTTATAAAGAGGGTGAGATGGAAGCTTTGCAAAAGGAGCGTGAATCTGAGAGGGATTGTGTGCAAAAATTGAAGGATGAAATACGCAACATTTCAGCATACTTGGCTAATGTTGATTTTTCATACCGTGATCCCATCAAGAACTTTGATAGGTCAAAGGTGAAGGGTGTTGTTGCAAAACTCATCAAAGTGAAAGATAGATCCACAGTGACTGCCCTAGAGGTTACAGCTGGTGGAAAGTTGTACAATGTTGTAGTTGACACAGAAAGTACTGGAAAACAGCTACTACAGAATGGCAATCTTAAAAGAAGAGTGACAATTATACCTTTGAACAAAATACAACCCTATGTTGTTACCTCAAGAGTTCAAGACGCCGCTGTTGAGTTGGTGGGCAAGGAGAATGCCGAAGTAGCACTTTCTTTGGTTGGTTATGAAGAAGAATTGAAGAAAGCAATGGAATATGTCTTTGGCTCAACCTTTGTTTGCAAAACTACCGATGCTGCAAAGAAGGTGGCATTTAGTAGTAATATTCGCACCACCAGTGTCACACTTGAAGGAGATATTTTTCAGCCAAGCGGTCTTCTTACTGGGGGAAGCCGGAAAGGAAGTGGTGATCTATTGAGGCAACTTCATGCTGTGGCTGAAGCTGAGTCAAAACTTTCAGTGCACCAGAGTAGGTTATCATCGATTGAGGCAAAGATCACAGAGCTTCTTCCTCTTCAGAAAAAATTTAAAGACCTTAAAGCACAATTAGAACTCAAGTCATATGATCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAACGAGCATCATAAGCTTGGAGAATTAGTGAAGAAGATTGAGCAAGAACTTGAAGAAGCAAATTCTGCAGTCAAAGAAAAGCAACTTTTATATGAAAACTGTGTCAAGACTGTTTCATCACTTGAGAAGTCAATCAAAGACCATGACAATAATCGAGAAAGTAGGCTAAAAGGTTTGGAGAAAAAGATAAAGTCGATTAAATCCCAAATGCAGTCATCTTCAAAAGACCTAAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATGGAAGCTGTTATCCAGGAGCAAGCTTCCTTGGAGCAACAATTAGCATCCATGAGAGCACAGATTACTAATCTTTCCTCAGAAGTAGAAGAACAAAAATCCACAGTTGCTGCTGCAAGGAATAATCTCGACGAAGCTCAGTCAGAGCTGAATGCAGTTCGTCAGAAAATGAAGCAGTGTGACAAGGAAATCAGTGGCATTGTTAAAGAGCAGAAAAAGCTTGAACATAAACTTAGTGAGAGTAATCTTGAAAGGAAGAGGATGGAAAACGAGGTAAAACGAATGGAGATGGAACAGAAAGACTGTTCTGTGAGGGTGGATAAATTGATGGAGAAGCATGCATGGATTGCTTCTGAAAAACAGTTGTTTGGTAAAAGTGGGACTGATTATGATTTTGCTTCTCGTGATCCTGGTAAAGCAAGGGAAGAACTCGAGAAGCTTCAGGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGGCAATGTTTGAGAAGGCAGAAGATGAGTACAATGACTTGATGTCAAAGAAAAATATAATTGAGAATGACAAGTCTAAAATCAAGAAAGTGATTGAAGAGCTAGATGAGAAAAAGAAAGAGACACTAAATGTTACCTGGACCAAAGTGAATACTGACTTTGGATCAATATTTTCTACACTATTACCGGGCACAATGGCTAAGTTAGAACCTCCAGAAGGATGCAGCTTTCTCGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTATGGAAACAGTCATTGTCTGAACTCAGTGGAGGTCAGCGATCATTGCTTGCACTTTCTCTGATTCTGGCACTGCTTCTTTTTAAACCTGCTCCACTTTACATCTTGGACGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGGAAGATGATAAAAAATCACTTTCCGCACTCCCAGTTTATTGTGGTGTCACTAAAGGAAGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTAGATGGTGTTTCAACTGTTCAGCGAACTGTAGCCAAGCAAAACAAGTGA | 3528 | 0.4002 | MYIKEICLEGFKSYATRTVVPGFDRFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSERSRSPLGYEGHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANCNAELDRLRRFCVAFEYVQAESIKDNATSEVEQVKAKIAEIDDIAKTTMVDVKEMETKIAQLTAEKEASMGGEMKSLSEKVDALSQSLVKETSVLNNKEDTLRSEEVNKEKIVKNIEELKQSVEEKASAIKKAEEGAADLKNRVEELSKSLEEHEKEYQGVLAGKSSGNEEKCLEDQLGDAKIAVGSAETELKQLKTKISHCEKELKEKKIQLRSKQDEATSVENELRARRKDVENIKTGLESLPYKEGEMEALQKERESERDCVQKLKDEIRNISAYLANVDFSYRDPIKNFDRSKVKGVVAKLIKVKDRSTVTALEVTAGGKLYNVVVDTESTGKQLLQNGNLKRRVTIIPLNKIQPYVVTSRVQDAAVELVGKENAEVALSLVGYEEELKKAMEYVFGSTFVCKTTDAAKKVAFSSNIRTTSVTLEGDIFQPSGLLTGGSRKGSGDLLRQLHAVAEAESKLSVHQSRLSSIEAKITELLPLQKKFKDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELEEANSAVKEKQLLYENCVKTVSSLEKSIKDHDNNRESRLKGLEKKIKSIKSQMQSSSKDLKGHDNEKERLVMEMEAVIQEQASLEQQLASMRAQITNLSSEVEEQKSTVAAARNNLDEAQSELNAVRQKMKQCDKEISGIVKEQKKLEHKLSESNLERKRMENEVKRMEMEQKDCSVRVDKLMEKHAWIASEKQLFGKSGTDYDFASRDPGKAREELEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWTKVNTDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGKMIKNHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAKQNK | 1175 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre15g01417 | 1175 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | 1 | 1173 | - | - | |
| Trre15g01417 | 1175 | Coils | Coil | 178 | 198 | - | - | |
| Trre15g01417 | 1175 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 1152 | IPR027417 | - | |
| Trre15g01417 | 1175 | Coils | Coil | 982 | 1026 | - | - | |
| Trre15g01417 | 1175 | Coils | Coil | 789 | 886 | - | - | |
| Trre15g01417 | 1175 | Coils | Coil | 894 | 928 | - | - | |
| Trre15g01417 | 1175 | Coils | Coil | 407 | 448 | - | - | |
| Trre15g01417 | 1175 | Gene3D | - | 995 | 1175 | IPR027417 | - | |
| Trre15g01417 | 1175 | CDD | ABC_SMC2_euk | 1 | 156 | IPR027120 | GO:0005524|GO:0016887 | |
| Trre15g01417 | 1175 | Gene3D | - | 592 | 666 | - | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre15g01417 | K06674 | - | gmx:100788674 | 1983.76 |
Showing 1 to 1 of 1 entries