Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01398 ATGGTGAGGATGTCCTACAAATCATTAGAAGAAGGAGGTTTCACCAAAACTGATCAATCTCCTGAAAAGATACCACCAGAATGTAATGAGTTTTTTCTTGTGCTCATGATCGTCCTATTATTTGTCTTCATGTTCATTGTCATAACATGCATTTCCGCGCCTCCGATGGAGTTCAACATAACTGAAGCTTCAATAACCCAATTCAACATCACAAGCAATAACATCTTATATTATAACTTTAGCGTCAGCATTGCAGTAACAAATTTCGAAAACCAAATATATGATTTTGAAGGGAAGAAGATGAATGCAATTTCTTCGTATAAAGGTAATCAATTAAATTCAGTGACTATGGTACCCTTTTTTCTAGGCAGTAAGAATACAATTAGACTTCAGCCCATAGTGTTTGAAGGGAACAGCTTGATCAAATTGGATCGCAAACAACTTGATGAGTATAATAAGGAGACACAATTGGGAATTTACAACTTACATTTGGAATTATCTAAATATATGGTTTGTCCAACTTTGAGAATTCCTATGATTTCTAATGGTAATTTGGTGCCTACTTTCAAAGTCGTCAAATGCTCGTATGACCGGTATCACCGGTGA 606 0.3548 MVRMSYKSLEEGGFTKTDQSPEKIPPECNEFFLVLMIVLLFVFMFIVITCISAPPMEFNITEASITQFNITSNNILYYNFSVSIAVTNFENQIYDFEGKKMNAISSYKGNQLNSVTMVPFFLGSKNTIRLQPIVFEGNSLIKLDRKQLDEYNKETQLGIYNLHLELSKYMVCPTLRIPMISNGNLVPTFKVVKCSYDRYHR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01398 201 MobiDBLite consensus disorder prediction 1 21 - -
Trre15g01398 201 PANTHER OS05G0367900 PROTEIN 31 166 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01398 Trre-Chr15 10861255 10861860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01398 51 179 SNARE and Associated Proteins AT1G32270 29.630 7.95e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01398 - - tpra:123886814 175.252