Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01397 ATGGTGAGGATGTCCTACAAATCATTAGAAGAAGGAGGTTTCACCAAAACTGATCAATCTCCTGAAAAGATACCACCAGAATGTAATGAGTTTTTTCTTGTGCTCATGATCGTCCTATTATTTGTCTTCATGTTCATTGTCATAACATGCATTTCCTCGCCTCCGATGGAGTTCAACATAACTGAAGCTTCAATAACCCAATTCAACATCACAAGCAATAACATCTTATATTATAACTTTAGCGTCAGCATTGCAGTAACAAATTTCGAAAACCAAATATATGATTTTGAAGGGAAGAAGATGAATGCAATTTCTTCGTATAAAGGTAATCAATTAAATTCAGTGACTATGGTACCCTTTTTTCTAGGCAGTAAGAATACAATTAGACTTCAGCCCATAGTGTTTGAAGGGAACAGCTTGATCAAATTGGATCGTAAACAACTTGTTGAGTATAACAAGGAGACACAATTGGGAATTTACAACTTACATTTGGAATTATCTAAATATATGGTTTGTCCAACTTTGAGAATTCCTATGATTTCTAATGATCGATGCATACAAAACAAAACAGTAAATAGAAAAAGAGAGGAGCAACTAGGGTTGAGGTCCGAGAGTGATTCTTCTGTGCAAGGTATAGATATATAG 645 0.3473 MVRMSYKSLEEGGFTKTDQSPEKIPPECNEFFLVLMIVLLFVFMFIVITCISSPPMEFNITEASITQFNITSNNILYYNFSVSIAVTNFENQIYDFEGKKMNAISSYKGNQLNSVTMVPFFLGSKNTIRLQPIVFEGNSLIKLDRKQLVEYNKETQLGIYNLHLELSKYMVCPTLRIPMISNDRCIQNKTVNRKREEQLGLRSESDSSVQGIDI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01397 214 MobiDBLite consensus disorder prediction 1 21 - -
Trre15g01397 214 PANTHER OS05G0367900 PROTEIN 31 166 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01397 Trre-Chr15 10857034 10861182 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01397 51 185 SNARE and Associated Proteins AT1G32270 30.496 6.47e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01397 - - tpra:123886814 160.614