Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01393 ATGTCCTACAAATCATCAGAAGAAGATTTCAAGATGTCCTACAAAGCATTAAAAGAAGATTCCAAGATGTCCTATAAATCATTAGAAGAAGGTTTCAACCAAACTAATCAATCTCCTGAAAAGCCACCACCAATATGTATTGGCTTTTTTTATCTTCTTCTCATTGGCCTGTTTTATTACTTCATAATTCCATGCATTATGACGCCTTCGATTGAGTTCAACATAACTGAAGCTTCAATAACCCAATTCAACATCACAAGCAACAACATCTTATATTATAACTTCAACCTCAGCATTACAGTAAGAAATTTCGAAAACCGAGTACGTACTGATTTTGAAAGGAAGATCGATGCAATTCCTTCGTACAAAGGTAATCAATTAAATTCAGTAACTATGGAACCCTTTTCTCTAGGTAGTGAGAAGAAAATTATACTTCAGCCCATAGTGTTTGAAGGGAACAGCCTTATGGAATTGGATCGTAAACAACTTGTTGAGTATAATAAGGAGACAAAATTGGGAATTTACAACTTACATTTCGAATTATCTAAATATGTGCATTGTCCAAGTTTGAGAATTCCTTTGATTTCCAATGGTAAATTGGCACCTACTTTCAAAGTCGTCAAATGCTCGTATGAGCCGCAGCCCTGGTGA 651 0.3518 MSYKSSEEDFKMSYKALKEDSKMSYKSLEEGFNQTNQSPEKPPPICIGFFYLLLIGLFYYFIIPCIMTPSIEFNITEASITQFNITSNNILYYNFNLSITVRNFENRVRTDFERKIDAIPSYKGNQLNSVTMEPFSLGSEKKIILQPIVFEGNSLMELDRKQLVEYNKETKLGIYNLHFELSKYVHCPSLRIPLISNGKLAPTFKVVKCSYEPQPW 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01393 216 PANTHER OS05G0367900 PROTEIN 45 179 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01393 Trre-Chr15 10827186 10827836 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01393 66 182 SNARE and Associated Proteins AT1G32270 28.205 9.97e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01393 - - tpra:123886814 171.785