Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01382 ATGAACACTCCAGTAATATTGGAGAATAGCGATATCATACAAGCCAAAGCTGCTTGGATCTATGCAGATAAATGTGTTTTCTTTGATTGTGCTTTTCTTGGGGTGCAAGATACCCTATGTGATGATTATGGTCGACATTACTACAAAAATTGTTACATTCAAGGTGGCATCGATTTCATATATGGGGATGGTCAATCTATCTTTGAGGCAAGTACAATATTTTTTTCAATGGGAAAATATGGTCCAAAAATAGATGGGGTTATTACAGCACATGAAAGGGAATCACCAAATGATACAAGTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGGACAGGAGGAAAGGCTGAACTTGGGAGGGCAATGGATGCTTATGCAAGAGTCATCGTATCTGATTCATACCTATCGGACGTGGTTAGTCCCGAGGGTTGGAGTCCTAGAACTTTTGTTGGCCACGAATCAAACATTACTTTTGTGGAGGAGGGAAATAGAGGACCTGGAGCAGACAAATCAAAGCGTGTGAAATGGATGAAGCACTTGAGTGGACATGAACTTGATAAATTCTTAAATATCTCATATATTGATGAAGAAGGATGGATTTCTGAATTGCCAAAAACTCTATTCATTTGA 630 0.3841 MNTPVILENSDIIQAKAAWIYADKCVFFDCAFLGVQDTLCDDYGRHYYKNCYIQGGIDFIYGDGQSIFEASTIFFSMGKYGPKIDGVITAHERESPNDTSGFVFKNCNISGTGGKAELGRAMDAYARVIVSDSYLSDVVSPEGWSPRTFVGHESNITFVEEGNRGPGADKSKRVKWMKHLSGHELDKFLNISYIDEEGWISELPKTLFI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01382 209 Gene3D - 2 207 IPR012334 -
Trre15g01382 209 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 201 - -
Trre15g01382 209 SUPERFAMILY Pectin lyase-like 14 201 IPR011050 -
Trre15g01382 209 Pfam Pectinesterase 14 195 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01382 Trre-Chr15 10748321 10749654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01382 1 200 Carbohydrate Esterase AT1G05310 39.706 4.26e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01382 - - mtr:25501033 353.984