Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01349 ATGCCATTACAATCCATGAATTTTCTATCAAATCCTTATGTTTTTGCAGCTTTGTCTGCATCTTTAACTTTTTTGTTAGTTCAATTTCTGTTGAGAAAATTGAACAAAAGCAATAATAGCATGAAGAAGAAGAAGAAGTACCATCCTGTTGCTGGAACTGTGTTTAATCAAATGATGAACTTCAACAGACTTCATCATTATATGACTGATCTTGCAAGAAAATACAAGACATACAGGTTGCTTAATCCTTTCAGAAATGAAGTTTATACTGCTGAACCATGTAATGTTGAGTATATACTCAAAACCAATTTTGACAATTATGGAAAGGGGCTTTACAACTACCACAATTTGAAGGATTTACTTGGAGATGGAATTTTTACAGTTGATGGCGAGAAATGGCGTGAACAAAGGAAGATATCAAGTCATGAATTCTCCACCAAGATGTTAAGGGACTTCAGTACTTTAATATTCAGAAAAAATGCAGTAAAAGTGGCAAATATTGTGTCTGAAGCTGCAAATTCGAATACTAAGTTAGAAATCCAAGATATTTTCATGAAATCAACACTGGATTCAATTTTCAAAGTTGCATTTGGTACTGAACTTGACAGCATGTGTGGAACAAATGAAGAGGGGAAGAATTTTGCCAATGCTTTTGATTCTGCAAGTGCGTCAACACTTTACCGTTATGTTGATGTCTTTTGGAAGATAAAGAAGTTTCTCAATATTGGATCCGAGGCAAAATTAAGAAATGACACTGAAATCTTAGATGAATTTGTTATTAAGCTAATCAACACTAGAATTCAGCAAATACAGAATTCAAAGGATGATTCTGTTAGCAAACGCAGCGATATTCTGTCAAGATTTCTGCAAGTGAAGGGATATGATACAAAATACTTAAGAGATATAATTCTAAACTTTGTTATTGCCGGGAAAGACACAACGGCCGCTACACTTTCTTGGTTCATGTATATGCTATGCAAGTACCCTGCAGTACAGGAAAAAGCTGCAAAAGAAGTGAGAGAAGCAACAAACACAAAAACAATTAGTAGCTGCACTGAGTTTGTTTCAAGTGTAACTGATGAAGCTATTGAAAAGATGACTTATCTTCATGCAGTTCTCACAGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCGAAGATTTGCTTTTGCGATGATACATTACCAGATGGATATAGTGTAAGAAAAGGAGACATGGTCTCTTACCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCAGAGGAATTTAGGCCAGAAAGATGGCTTGATGAGAATGGCATTTTTCAGCCAGAAAGCCCTTTCAAGTTTACTGCTTTTCAGGCAGGTCCCAGGATATGTCTAGGAAAGGAGTTTGCTTATAGACAAATGAAGATATTCTCAGCTGTTTTATTAGGTTGTTTTCGTTTCAAATTGAACGATGAGAAGAAAAATGTGACTTATAAGACGATGATAAATCTTCATATTGATGGAGGTCTTGAAATCAAAGCCTTACACAGGGATTAG 1542 0.3573 MPLQSMNFLSNPYVFAALSASLTFLLVQFLLRKLNKSNNSMKKKKKYHPVAGTVFNQMMNFNRLHHYMTDLARKYKTYRLLNPFRNEVYTAEPCNVEYILKTNFDNYGKGLYNYHNLKDLLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSTLIFRKNAVKVANIVSEAANSNTKLEIQDIFMKSTLDSIFKVAFGTELDSMCGTNEEGKNFANAFDSASASTLYRYVDVFWKIKKFLNIGSEAKLRNDTEILDEFVIKLINTRIQQIQNSKDDSVSKRSDILSRFLQVKGYDTKYLRDIILNFVIAGKDTTAATLSWFMYMLCKYPAVQEKAAKEVREATNTKTISSCTEFVSSVTDEAIEKMTYLHAVLTETLRLYPAVPVDAKICFCDDTLPDGYSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEIKALHRD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01349 513 PANTHER CYTOCHROME P450 30 505 - -
Trre15g01349 513 SUPERFAMILY Cytochrome P450 46 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 Pfam Cytochrome P450 47 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01349 513 CDD CYP86A 76 505 - -
Trre15g01349 513 Gene3D Cytochrome P450 32 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01349 Trre-Chr15 10459232 10463254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01349 6 512 Cytochrome P450 AT2G45510 51.845 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01349 - - gmx:100789049 845.499