Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01342 ATGTTGAATTTCATATTCTTATCTTTTCTAGCTCTTTTCTTAGCCTTGTGTTTCATCATGATAACAATTTTCAAAGGAAAATCCTTAGGGAACCCAAAATATGCACCTGTTAAAGGCACAATGTTTAACCTACTTTTCAACTTCAATAAAATGCATGATTACCAAACTCAAATGGCCAAAACTCATCCAACTTTGAGGCTTCTTACTCCATATGGTAGTAACTTGTACACAATAGATGTGAGAAATATTGAACATATATTGAAAACCAATTTTGATAAATACTCCAAAGGTATCCATAATCAAGATATCATGATTGATCTTTTTGGTGAGGGGATTTTTGTTGTTGATGGTGATAAGTGGAAGCTACAGAGAAAAGTTGCTAGCTATGAATTCTCCACAAGAGTTCTTAGAGATTTTAGTTGTTCTATTTTTAGAAAGAATGCTGCCAAATTGGTCAAAGTTATATTACAATTTTCTCAAGAAGGACTTGTTTTTGATATGCAAGACTTACAAATGAGATGTGCCATGGATTCAATATTCAAAGTTGGGTTTGGAACAGAACTGAATTGCTTAGATGGATCAAGTAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAGATGCTTTAATTTTCTGGCGGTTTGTTGATCCAATTTGGAGCATTAAGAGGTATCTTAATATTGGTGGTGAGGCTAAGCTTAAGCGCAATATCAAATTGATGAATGAATTTGTCAATGGAGTAATAAAAGCCAAAAAGGAAAAGTTGGAACTTCAACAAGATTCTAATATTAAAGAAGACATACTATCAAGGTTTTTAATGGAGAGCAAGAAGGACCAAACAACAATAACCGACAAGTATTTGAAAGACATAATTCTTAACTTTATGATAGCTGGAAAAGACACCACTGCAAACACTCTTTCATGGTTCTTCTACATGTTATGCAAGAACCCTCTTGTAGAACACAAGATTGTGCAAGAAATAAAAGATGTCACTTTTAGCCATGAAAGTGAACTCAACAACATAGATGAGTTTGTTGCCAATTTAACAGATGTCATCCTTGATAAGATGCATTATCTTCATGCAGCATTGACAGAGACATTGAGATTGTACCCTGTAGTCCCTGTGAATGGAAGATATGCAGATGCACCTGATGTTCTTCCAGATGGTCACCAAATAGAAAAGGGTGATGGAGTCTACTACTTGTCCTACGCTATGGGTCGAATGTCATCCATTTGGGGAGAAAATGCTGAGGAATTTCGTCCAGAAAGATGGATTAACAATGGAATTTTCCAACCCGAATCGCCATTCAAATTTGTAGCATTCCATGGTGGACCTCGTGTGTGCTTAGGGAAGGATTTTGCATACAGACAAATGAAAATAGTAGCAATGTCTCTTCTTCATTTCTTCAAATTTAAATTGGCAAATGGAATAGAAAATGTGACTTATAAGGTCATGTTTACCCTTCACTTGGACAAGGGTCTTCCTCTCAATGCAATTCCAAGGTCATGA 1515 0.3558 MLNFIFLSFLALFLALCFIMITIFKGKSLGNPKYAPVKGTMFNLLFNFNKMHDYQTQMAKTHPTLRLLTPYGSNLYTIDVRNIEHILKTNFDKYSKGIHNQDIMIDLFGEGIFVVDGDKWKLQRKVASYEFSTRVLRDFSCSIFRKNAAKLVKVILQFSQEGLVFDMQDLQMRCAMDSIFKVGFGTELNCLDGSSKEGTEFMKAFDESDALIFWRFVDPIWSIKRYLNIGGEAKLKRNIKLMNEFVNGVIKAKKEKLELQQDSNIKEDILSRFLMESKKDQTTITDKYLKDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEHKIVQEIKDVTFSHESELNNIDEFVANLTDVILDKMHYLHAALTETLRLYPVVPVNGRYADAPDVLPDGHQIEKGDGVYYLSYAMGRMSSIWGENAEEFRPERWINNGIFQPESPFKFVAFHGGPRVCLGKDFAYRQMKIVAMSLLHFFKFKLANGIENVTYKVMFTLHLDKGLPLNAIPRS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01342 504 PANTHER CYTOCHROME P450 21 496 - -
Trre15g01342 504 SUPERFAMILY Cytochrome P450 28 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 CDD CYP86A 63 496 - -
Trre15g01342 504 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Trre15g01342 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01342 504 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01342 Trre-Chr15 10392113 10396670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01342 11 504 Cytochrome P450 AT2G45510 60.362 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01342 - - tpra:123900158 877.47