Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01338 ATGAAAATGCAGAAAGCTTGGTTCTATGAGGAGTATGGTCCTAAGGAAGTCCTTAAACTAGGGGACTTACCTATTCCATCTCCTATTCATAACCAACTACTTGTCCAAGTTTGTGCTGCTGCTTTGAATCCGATTGATTCAAAGAGGCGTTTGCGTCCTATTTTCCCTTCCAAGTTTCCTGTGGTTCCCGGATGTGATATGGCTGGTGTGGTGATAGGAAAAGGCGTTAATGTCAAAAAATTTGAAATTGGTGATGAAGTCTATGGCAACATTCAAGATTTCAATAATACTGATGAAAAGCCAAAGCAACTTGGAACTTTGGCACAGTTCATTGTTGTGGAAGAGAATTTAGTTGCAAGAAAACCAAAATGTCTTTCATTTGAGGAAGCTGCAAGTTTGCCATTGGCAGTTCAAACAGCAATTGAAGGATTCAAAACTGGTGATTTTAAGAAAGGTGAGACAATGTTTGTGGTTGGTGGAGCAGGTGGTGTTGGAACTTTGGTTCTTCAATTGGCCAAACTTCTGTTTGGAGCTTCTTATGTTGTGTCTTCATGTAGCACACCTAAAGTGGAGTTTGTGAAGCAATTTGGTGCTGATGAAGTGGTGGATTATACTAAGACTAAATATGAAGACATTGAGAAGAAATTTGATTTTCTTTATGATACAGTTGGTGATTGCAAGAAATCATTTGTGGTAGCAAAGAAAGATGGAGCAATAGTTGACATAACATGGCCACCATCACATCCAAGAGCAGTTTATTCAAGTTTGACTGTATCTGGTGAAATTTTGGAAAATCTGAGACCATATTTGGAAAGAGGAGAATTAAAAGCAGTGATTGATCCAAAAGGTAAATATGATTTTGAGAATGTGATGGAAGCTTTTGGTTACATAGAAACTGGAAGAGCTTGGGGAAAAGTTGTTGTGTCATGCTTCCCTATGGACAATATTAATATGGAGAATATTAGTATTCCTAATCATAATCAGCCTTCCATTTTATCTGAGATTGATACCAATATACATGTCAATGGTAATTTGGAAAAAGATCTTGATTGTCTCAACAAGTAA 1065 0.3728 MKMQKAWFYEEYGPKEVLKLGDLPIPSPIHNQLLVQVCAAALNPIDSKRRLRPIFPSKFPVVPGCDMAGVVIGKGVNVKKFEIGDEVYGNIQDFNNTDEKPKQLGTLAQFIVVEENLVARKPKCLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLLFGASYVVSSCSTPKVEFVKQFGADEVVDYTKTKYEDIEKKFDFLYDTVGDCKKSFVVAKKDGAIVDITWPPSHPRAVYSSLTVSGEILENLRPYLERGELKAVIDPKGKYDFENVMEAFGYIETGRAWGKVVVSCFPMDNINMENISIPNHNQPSILSEIDTNIHVNGNLEKDLDCLNK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01338 354 CDD MDR_like_2 5 308 - -
Trre15g01338 354 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 310 IPR044626 GO:0016628
Trre15g01338 354 Pfam Alcohol dehydrogenase GroES-like domain 31 90 IPR013154 -
Trre15g01338 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 125 259 IPR036291 -
Trre15g01338 354 Coils Coil 342 354 - -
Trre15g01338 354 Gene3D - 144 259 - -
Trre15g01338 354 Gene3D - 11 308 - -
Trre15g01338 354 SUPERFAMILY GroES-like 3 157 IPR011032 -
Trre15g01338 354 SMART PKS_ER_names_mod 13 308 IPR020843 GO:0016491
Trre15g01338 354 Pfam Zinc-binding dehydrogenase 197 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01338 Trre-Chr15 10368176 10370077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01338 4 223 Monolignol Biosynthesis Gene Families AT3G19450 25.610 1.03e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01338 K18980 - cave:132187488 475.322