Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01333 ATGCCATCCCGTCCGCCGCCACAACAACCACCTCTTCCAACCGCCCACCACCACCACCACCACCACCGTCAAATCATCCTCGGCAGCTGCATCGCTGCCGCCGTCTTCCTAACAGCAGCAATAATCTCCCTCGTAATCTTCCTCTACCGTAAACTATCACACAACCGAACAACACCGTTCGAACAAAGCCAAAGAAGATTCTCTTACTCTGTTCTCCGTCGTGCTTCAAATTCATTCTCACCTTCAACTCGTCTCGGTCATGGAGGTTTCGGTTCAGTTCACAAAGCTACTCTTCCTTCCGGCGAAACCGTCGCTTTGAAAGTAATGGATTCACCTGGTTCGATTCAAGGTGAGAGAGAGTTTCATAACGAACTTTCTCTTTGTTCAAATCTGAATTCACCGTTCATTCTTTCACTTCTCGGTTATTCTTCTGACCGGTCCGGGAAAAAGCTTGTTTTGGTTTATGAACTTATGGTGAACCGGAGTCTTCAAGATGCGCTATTGGACCGGAAGTGTGCTGAATTGATGTGTTGGTCCAACCGGTTCGATGTTGTTGTTTCGGTTGCTAAAGGACTTGAGTATCTTCATCATCAATGTCATCCTCCGGTGATTCATGGTGATATTAAACCTAGTAATGTTCTTTTGGATCGTGAATTTAGGGCTAAAATTGGGGATTTTGGTCTTGCTAGAGTTAAGTGTTTGGAAGATTCTGGAATGGAAATGATGGTTGAGGAGATTCATGTGAAGAAAAAAAGAGAGGATCTTGTTGTTGGTGTTGCTGTTGAGGATTGTAGTTCTGTTTCTGTTGTTGAGGAATTTGAGAGTGTTGTTACTAATACTACTGTTGGATTTGATGTTGATCGGTCGCCGGAGAGTTGTAATGTGAGGGTTTTGGATTCTGATGCTGCTTCGCCTGAGGTTTCGCTTTCGCCGGAGGTGGGGGTTGTGTCGCCGGAGATGAGCGGGGTTGAGAAATTAAGTGTTGTGTCTGATGGTTGTTTTGATAAGTTTAGTATTGATAGTGGGAATCAGAGGAAGAGAGGTGGTGGTGGTTGTGGTGGTGGTGGTTCTGGGAGGGATTGGTGGTGGAAGCAAGAGAATAATGGGGGAGGATCTGAATCAGGGAGGGTGAAGGATTATGTTATGGAGTGGATTGGGAGTGAGATAAAGAAAGAGAGACCTAAGAGTAGTGAATGGGTTGGTTCTGGTTCATCGATTTGTTCCGGTGGTGATGCCGCTGCGCCGTCGAAGGTGGAGGGTAAGAAGAAACAGAGGAAGAAATTGGAATGGTGGGCTTCACTTGATGAGGAGAAGGGTAAAGGGAAGAAGAATAGGAAACCAAGGGAATGGTGGAAGGAGGAGTTTTGTGAAGAGCTTTCAAAAAAGAGTAGGAAGAAAAAGAGAAGTCTTGATTGTCGCGTCGGAGGCGGCGGTGGGGAATCATGGTGGCAAAGAGACGACGATGTAGGTAATGCGGCGGCGGAGAAGAAGAAAAAGAGGAAAAGTAAGAGCAGTAGAGGGAGTATTGATTGGTGGTTGGATGGATTAAGTGGCGAGCTTAGGAATAATGGAAGAAGAAATAGTCAAGATTGGGGTAATGGTGATGTACCAAAGAGTGGTGGAATAAGTAGCACACCAAGTATGAGAGGAACAGTTTGTTACATTGCTCCTGAATATGGTGGTGGTGGACAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCGGGAAGAAGACCACTTCAAGTAACAGCATCACCAATTTCAGAATTTGAGAGAGCAAATCTAATTTCATGGGCTAGACAACTTGCTCATAATGGGAAACTATTGGATCTTGTTGATAGTTCTATTCATTCTTTGGATAAAGAACAAGCATTGCTTTGCATCACCATTGCATTGTTGTGTTTGCAGAGATCACCTGGGAAAAGACCTTCCATGAAAGATATTGTTGGAATGCTTTCTGGTGAGGCTGACCCACCTCATTTACCCTTTGAATTCTCACCTTCACCACCCTCTAATTTCCCTTTCAAATCAAGAAAAAAGGCTAGTGCCAATTTCGGTGGGTTAGTTCATACAAAGCTTGTTTTGGCTTTAAATGATCCCCCGCAAGTGGAAGATGGGATGAAATCCCTCAGATTAGTCGGTCCTTAG 2172 0.4457 MPSRPPPQQPPLPTAHHHHHHHRQIILGSCIAAAVFLTAAIISLVIFLYRKLSHNRTTPFEQSQRRFSYSVLRRASNSFSPSTRLGHGGFGSVHKATLPSGETVALKVMDSPGSIQGEREFHNELSLCSNLNSPFILSLLGYSSDRSGKKLVLVYELMVNRSLQDALLDRKCAELMCWSNRFDVVVSVAKGLEYLHHQCHPPVIHGDIKPSNVLLDREFRAKIGDFGLARVKCLEDSGMEMMVEEIHVKKKREDLVVGVAVEDCSSVSVVEEFESVVTNTTVGFDVDRSPESCNVRVLDSDAASPEVSLSPEVGVVSPEMSGVEKLSVVSDGCFDKFSIDSGNQRKRGGGGCGGGGSGRDWWWKQENNGGGSESGRVKDYVMEWIGSEIKKERPKSSEWVGSGSSICSGGDAAAPSKVEGKKKQRKKLEWWASLDEEKGKGKKNRKPREWWKEEFCEELSKKSRKKKRSLDCRVGGGGGESWWQRDDDVGNAAAEKKKKRKSKSSRGSIDWWLDGLSGELRNNGRRNSQDWGNGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLDLVDSSIHSLDKEQALLCITIALLCLQRSPGKRPSMKDIVGMLSGEADPPHLPFEFSPSPPSNFPFKSRKKASANFGGLVHTKLVLALNDPPQVEDGMKSLRLVGP 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01333 723 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Trre15g01333 723 ProSiteProfiles Protein kinase domain profile. 79 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01333 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Trre15g01333 723 SUPERFAMILY Protein kinase-like (PK-like) 53 680 IPR011009 -
Trre15g01333 723 Pfam Protein kinase domain 82 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01333 723 Pfam Protein kinase domain 545 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01333 723 PANTHER OS07G0586332 PROTEIN 1 689 IPR044576 -
Trre15g01333 723 SMART serkin_6 79 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01333 723 MobiDBLite consensus disorder prediction 344 375 - -
Trre15g01333 723 Gene3D Transferase(Phosphotransferase) domain 1 158 273 - -
Trre15g01333 723 Gene3D Transferase(Phosphotransferase) domain 1 515 666 - -
Trre15g01333 723 MobiDBLite consensus disorder prediction 523 544 - -
Trre15g01333 723 FunFam Os07g0541700 protein 158 245 - -
Trre15g01333 723 Gene3D Phosphorylase Kinase; domain 1 44 157 - -
Trre15g01333 723 MobiDBLite consensus disorder prediction 392 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01333 Trre-Chr15 10313280 10315625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01333 520 660 Receptor kinase-like Gene Family AT3G58690 36.242 3.01e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Trre15g01333 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01333 - - aip:107626015 874.389