Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01329 ATGTCGTCAAAATTTGATCCATACAGCCACTTTGGCTTGAGTTTAAACCCCGATGGAAGCCTCCACCGTGCCTACCAGACTCCCAAAACCGAGCCGAACCCCGAGCCTCTACCGGGGATTTCCACGGTATCCAAAGACATAACCATTAACAATGAGAAAAAACTATGGGTTCGAATATTCAGGCCAACAAAACTTCCATCAAACGACAACACGGTAGCGCGTCTACCGATATTGATCTACTTTCACAGTGGTGGTTGGATAATCTTCAGCCCTGCTGACAATGACATTCATAAAAAATGTTCGAATTTCGCTTCTGACATTCCTAGTATTGTTATCTCTGTAGCCTATCGTAGGGCGCCAGAGAGCAGGCTCCCCGGGCAATACCAAGATGCCCGGGAAACTATTTTGTGGGTGAAGAAACAAGTGACTGATTCTAATGGCGAGAAGTGGTTGAGAGACTATGGTGATCCTTCAAGGTGTTATCTTTATGGATGTGGTTGTGGTGGGAACATTGTGTTTAATACAGCTATGCAAATTGAGGACATGGACTTGGAGCCTCTAAAAATTGGTGGTCTTGTTATGAACCAACCTATGTTTTCTGGAGAGAAAAGAACAGCTTCAGAATTGAGGTTTGCCACGGACCAGACTCTGCCCTTACCAGTGTTGGACATGATGTGGGATTTGGCTTTGCCTAAGGAAACAGATCGTGACCATAGGTATTGCAATCCAATGGTGCAAGGACCACATTTGGAAAATGTCAAGAAATTAAAGAGATGTCTTATTATTGGGTATGGTGGAGACATCATGGTTGATCGACAACAAGAATTTGTGACCATGTTGGTCAAACGTGGGGTCCAGGTTGAAGCTCGTTTTGATCCTGTGGGGTTCCACAATATTGATATGGTGGACCCTGCTAGAGCTAGTGCAGTTATAAATATTGTAAGGGAGTTTATACTTTGA 960 0.4406 MSSKFDPYSHFGLSLNPDGSLHRAYQTPKTEPNPEPLPGISTVSKDITINNEKKLWVRIFRPTKLPSNDNTVARLPILIYFHSGGWIIFSPADNDIHKKCSNFASDIPSIVISVAYRRAPESRLPGQYQDARETILWVKKQVTDSNGEKWLRDYGDPSRCYLYGCGCGGNIVFNTAMQIEDMDLEPLKIGGLVMNQPMFSGEKRTASELRFATDQTLPLPVLDMMWDLALPKETDRDHRYCNPMVQGPHLENVKKLKRCLIIGYGGDIMVDRQQEFVTMLVKRGVQVEARFDPVGFHNIDMVDPARASAVINIVREFIL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01329 319 PANTHER ARYLACETAMIDE DEACETYLASE 23 298 - -
Trre15g01329 319 Gene3D alpha/beta hydrolase 9 319 IPR029058 -
Trre15g01329 319 SUPERFAMILY alpha/beta-Hydrolases 32 305 IPR029058 -
Trre15g01329 319 Pfam alpha/beta hydrolase fold 78 298 IPR013094 GO:0016787
Trre15g01329 319 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01329 Trre-Chr15 10295434 10297508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01329 18 276 Carbohydrate Esterase AT1G68620 31.418 2.70e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01329 - - gmx:100813863 494.582