Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01304 ATGTTACTGGATTATAAGTCAATCATGTTAATGCTAAATATGTTTTTACATAAATTTACCAACTCCTATTCTCTTCTTTGGCTTCCATTACTGCTGATTATACTAAGCAATGTTTCAGTTAATGGTGTTGACCAAAAGAACTTTTACATTGTTTTCTTAGGAGCTCAACCTGTTAGTAGAGAAGGAGCAGTAGAGAATCATTTAAATATTCTCTCAGCTGTTAAACAAAGCCATCTTGAAGCCAAAGAATCCATAGTATACAGCTACACAAAGAACTTTAATGCATTTGCTGCTAAACTATCTGAAGATGAAGCCAACAAGTTATCTGGCATGAATGAAGTGCTCTCAGTATTTCCGAATCAGTACCGCAAGATACACACAACAAGATCATGGAACTTCATTGGATTACCTTTGACAGCTAAGAGAAAACTGAAATCAGAAGGTGACACAATTGTGGCTCTTTTGGATACAGGTATAACTCCCGAGTTTCAAAGCTTCAAGGATGATGGATTTGGTCCTCCACCTGCTAAATGGAAAGGAACTTGTGACAAATATGTTAATTTCTCAGGCTGCAATAACAAGATCATTGGAGCCAAATACTTCAAACTTGATGGAAGGTCTGATCCATCTGATATATTATCTCCCGTAGATGTACAAGGCCATGGAACTCATACTGCATCAACAGCAGCAGGAAATCTTGTCCCGAATGCAAGTCTCTTCGGATTAGCCAATGGCACGGCTCGTGGGGCGGTGCCTTCAGCTAGGTTGGCAATTTACAAAGTCTGCTGGACAGAAGATGGATGTGCTGATATGGATATACTTGCTGCATTTGAGGCTGCTATACATGATGGCGTGGATGTCATATCGGTTTCGTTAGGTGGAGGAAATGAAAATTATGCGAAGGACTCTATAGCAATTGGTGCATTTCATGCCATGAGGAAAGGCATAATCACAGTCGCCTCTGCTGGAAATGGTGGTCCAGCTATGGCATCTGTCGTAAATAATGCGCCGTGGATAGTCACAGTAGCTGCTAGTGGCATTGATAGAGACTTCCAAAGCATTGTAGAGTTGGGGAGTAGAAAAAGTGTTTCTGGAGAAGGAATAAGCATTTTCAGTCCAAAACAAAAACAATATCCCCTTGTTAACGGGATGGATGCAGCGCGAAACTCTTCAAGAAAGGAAGACGCTAAGTTCTGCGATGACGACTCCTTAGAGCCAAAAAAGGTGAAAGGAAAGATTGTTTACTGTAGATATAGAACATGGGGCACTGATGCTGTTGTGAAAGCAATAGGAGGCATTGGTACTATACTTGAAAATAATCCATTACTAGATTTTGCTCAAATATTCAGTGCTCCTTCTACCTTTGTAAATGAAAGCACAGGTCAAATTATTACCAATTATATACAATCTACAAGATCACCATCAGCAGTGATACATAAGAGCCATGAAGTGAAAATACCAGCTCCATTTGTTGCTTCTTTTTCATCTAGAGGTCCAAATCCAGGATCTCAACATGTTCTCAAGCCTGATGTAACAGCTCCTGGCATTAACATCTTGGCATCATATACACTTAGGACATCAATTACTGGTTTCAAAGACGACACTCAATTTTCAGAATTTACACTAATGTCCGGTACTTCCATGTCTTGCCCTCATGTTTCTGGCGTTGCAGCATATGTGAAGTCATTTCACCCGGATTGGACTCCTGCTGCAATTAGATCAGCTATAATGACCACAGCTAAACCTATGAGCCAAAAAGTTAACAAGGAGGCAGAGTTTGCTTTTGGTGCCGGTCAAGTTAACCCAACAAGAGCTGTGAATCCTGGTTTAGTCTACGACATGGATGACTTCGCTTATATCCAGTTCTTATGCCATGAGGGATATAATGGTTCGACTTTATCAGTACTAATTGGTTCTCCAATAAATTGCACTTCTTTGCTTCCTGGGATTGGCCATGACGCTATTAACTATCCTAGCATGCAATTAAGTGTTAAAAGCAACACCGACAAGACAATAGGAGTTTTCAGGAGAAGAGTTACCAACGTAGGTCCAGGACCAACCATCTATAATGCTACCATAAAATCTCCAAAAGGAGTCGAAATCACAGTAAGGCCTACTAGTCTCAATTTCTCTCATACCTTGCAAAAGAGGAGCTTCAAGGTAGTAGTGAAAGCGAAATCTATGGCAAGCATGCAAATTGTATCAGGCTCGCTGATTTGGAGAAACGCTCGTTATATTGTTAGAAGCCCTATTGTTATCTACAGTCCATGA 2271 0.4047 MLLDYKSIMLMLNMFLHKFTNSYSLLWLPLLLIILSNVSVNGVDQKNFYIVFLGAQPVSREGAVENHLNILSAVKQSHLEAKESIVYSYTKNFNAFAAKLSEDEANKLSGMNEVLSVFPNQYRKIHTTRSWNFIGLPLTAKRKLKSEGDTIVALLDTGITPEFQSFKDDGFGPPPAKWKGTCDKYVNFSGCNNKIIGAKYFKLDGRSDPSDILSPVDVQGHGTHTASTAAGNLVPNASLFGLANGTARGAVPSARLAIYKVCWTEDGCADMDILAAFEAAIHDGVDVISVSLGGGNENYAKDSIAIGAFHAMRKGIITVASAGNGGPAMASVVNNAPWIVTVAASGIDRDFQSIVELGSRKSVSGEGISIFSPKQKQYPLVNGMDAARNSSRKEDAKFCDDDSLEPKKVKGKIVYCRYRTWGTDAVVKAIGGIGTILENNPLLDFAQIFSAPSTFVNESTGQIITNYIQSTRSPSAVIHKSHEVKIPAPFVASFSSRGPNPGSQHVLKPDVTAPGINILASYTLRTSITGFKDDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIMTTAKPMSQKVNKEAEFAFGAGQVNPTRAVNPGLVYDMDDFAYIQFLCHEGYNGSTLSVLIGSPINCTSLLPGIGHDAINYPSMQLSVKSNTDKTIGVFRRRVTNVGPGPTIYNATIKSPKGVEITVRPTSLNFSHTLQKRSFKVVVKAKSMASMQIVSGSLIWRNARYIVRSPIVIYSP 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01304 756 CDD Peptidases_S8_3 124 580 IPR034197 -
Trre15g01304 756 Pfam Subtilase family 149 598 IPR000209 GO:0006508|GO:0008236
Trre15g01304 756 FunFam Subtilisin-like protease SBT5.3 38 126 - -
Trre15g01304 756 FunFam Subtilisin-like protease SBT1.5 149 395 - -
Trre15g01304 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 36 126 IPR037045 -
Trre15g01304 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Trre15g01304 756 Gene3D - 623 755 - -
Trre15g01304 756 Gene3D - 348 484 - -
Trre15g01304 756 ProSiteProfiles Serine proteases, subtilase domain profile. 130 606 - -
Trre15g01304 756 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Trre15g01304 756 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Trre15g01304 756 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Trre15g01304 756 CDD PA_subtilisin_like 355 478 - -
Trre15g01304 756 Pfam Peptidase inhibitor I9 49 126 IPR010259 -
Trre15g01304 756 Pfam Fibronectin type-III domain 655 753 IPR041469 -
Trre15g01304 756 Gene3D Peptidase S8/S53 domain 149 616 IPR036852 GO:0004252|GO:0006508
Trre15g01304 756 SUPERFAMILY Subtilisin-like 125 610 IPR036852 GO:0004252|GO:0006508
Trre15g01304 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 78 752 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01304 Trre-Chr15 10082250 10086296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01304 46 594 Subtilisin-like Serine Gene Family AT4G00230 63.752 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01304 - - ccaj:109800351 1258.43