Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01300 ATGTCCGAAGAAGCTTCTAGAAACATTGATCTAACTCTCGGTGATCCCAAAGAGGAACCGGAAACAGAAGATGGGTCAGCTATAAAAGTGATGCCGATGCACGTTCCCATGCAAATGAACCAGGCCCAATCCCAAGCCCAGGCTCAGGCCCAACAACAACCGCATCAAAAGAGAGCCTCTACGAAAGACCGTCACACCAAAGTAGAAGGAAGAGGCAGAAGAATCCGAATGCCTGCCACGTGTGCGGCTAGGATCTTCCAACTAACACGAGAACTCGGTCATAAATCCGACGGTGAAACAATCCGGTGGCTACTTGAACACGCGGAACCTGCCATCATTGCCGCCACCGGAACCGGCACCGTCCCCGCCATCGCCATGTCTGTTAACGGCACTCTCAAAATTCCAACCACTTCCCCAAATAAGGATCATGAACCACAACAATCCGAAGACTCGCCGGAGAAAAAGAAACGTAAAAGACCATCGAACAGTGCTTACGTGGACATAAACGACAGCGTTTCAGTTTCAGCAGGTTTAATAACAAGCTCAAACATAAACCAGAATCTAACAGCCACCAATATAATTCCGCAACAAACTGCAATTCCGTTACCGCAAAATATGGTTCCTGTGTGGGCCATACCATCAAACGCAGTCGTTTCAGGTGGAAACGCGTTTTTCATGGTTCCAACGAATCAGCCTCAGTTTTTTACATTAGCTAGACCAATAACCGGTTTCGTTTCTTCAATGGTAACACCGGTTATTCAACTCCAACAACAAGCCTCCACGTCATCGAACACGTGTACGACATCTCCGGTGGTAAAGTCTCCGGCGAGAGCCAGCGTGATGGCGCCGAGTACCGCCGCAACAACCACCACGCAGATGTTGAGGGATTTTTCGTTGGAGATATATGATAGACAAGAGCTTCAGCTATTGAGAGAACGAAATTGA 945 0.4825 MSEEASRNIDLTLGDPKEEPETEDGSAIKVMPMHVPMQMNQAQSQAQAQAQQQPHQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPNKDHEPQQSEDSPEKKKRKRPSNSAYVDINDSVSVSAGLITSSNINQNLTATNIIPQQTAIPLPQNMVPVWAIPSNAVVSGGNAFFMVPTNQPQFFTLARPITGFVSSMVTPVIQLQQQASTSSNTCTTSPVVKSPARASVMAPSTAATTTTQMLRDFSLEIYDRQELQLLRERN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01300 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 302 IPR005333 GO:0003700
Trre15g01300 314 MobiDBLite consensus disorder prediction 57 71 - -
Trre15g01300 314 MobiDBLite consensus disorder prediction 37 56 - -
Trre15g01300 314 MobiDBLite consensus disorder prediction 132 164 - -
Trre15g01300 314 Pfam TCP family transcription factor 60 159 IPR017887 -
Trre15g01300 314 MobiDBLite consensus disorder prediction 143 163 - -
Trre15g01300 314 MobiDBLite consensus disorder prediction 1 71 - -
Trre15g01300 314 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
Trre15g01300 314 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01300 Trre-Chr15 10049868 10050812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01300 54 308 TCP Transcription Factor Family AT2G45680 56.747 8.97e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre15g01300 TCP 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01300 - - cam:101488699 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01300 15 10049868 10050812 Trre15g01300 15 10049868 10050812 ECH