Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01288 ATGGAGGTGGTGCAACTAAGAAGATTCAACTCAATGGAAAGAAGGCCAAGAATGTTGAAAGATTTCCTAAGCGAGAATCTAAGTTCATGTTCTTCAAGCGGATTCAAATCACTTCCGAGAAGAACAAATACCATTCAAATTCATCACACACATTCATCATCATCATCATCAAGATTTCAAACACTGATAAAAACCATAAAAAACAACGTATCATTCTTCAAAATTACAAAATCACCCTCCACCATGCTTTCACTACCACGAACACTATCACGCAAATTATCATCAAAGAGAAGAACAACAAGAACAAGTCAAAGATGCAAAGGAGAAAGAGAAATTGAAATCGAAATCAGTACGGTGAAGATTAAAGATATCATACGGTGGAAATCGTTTCGAGATTTACAACCTTCTGTTCCGTTACCGCCGCTTGATTTTAACCGTTATGTAACGGAATCGTCGACGGTTACGACTGCGACGACGACTTGTTCTAGTAGTGACGGTGGTTCTAGTTGGAGTGACGGTGATTTTTTTAGTGATTTGTGGGAAGCGCAAAACGACGGCGTTGAAGAGAGTAAAAAAAGTTCGTTTTTATCTTTTTTTGTCGGCAAGGATTCGGTGGCGCCATCGTTCGTTGGGACAAAGGAAGATTTGACTTGCCAAGATGAACAACAGAGTCCAGTTTCAGTTCTTCATGTTGCAGAAAATGAATTTTCAATCTTTGATCAAAGCCTTGCCAATATTGAAAGGAGAAAACAAAAATTCAAACAAACTGCTGATAAATTTGAGAGTCATGTAAAATTTGACTTTGCAAGCTTAGATGGATGTCTTTCATTGGATGAGAACTCATATTATGATGAAGAATATAAAGATGACAATAAGGAGGAGGTGGACCAAAAAGTTGAACGATTAGATTGGGTTGAGGAAAAGGCAAATCAATTGCTACATTGTGTTAAAGCAAAATGTTCATCAGTGGAAAAATGTGATGACAATTTTGGTATAGTTCTCTTGGATTTTTTCAGGGAAGAACTAAGAGGTAATAGAAACCAAAAGAGGAACAGTGAGGAGTTTGAGTTGGAGATAATGAAAATAGCTGAGGATTGGATCAATGAGTCATTTGAAAATGCTTATGACATTGTGCATGTTAATAAAGATGCTTATATCAAGGAAATGGATAGAAGAGGTCAGTGGAATAGGTTTGAGGAGGAGCAAGAAGAAATGGTTTTTGAGATTGAGGCAGCTATATTGCGTAGTTTGGTTGATGAGATTTTTGACATAGATGGTTAA 1281 0.37 MEVVQLRRFNSMERRPRMLKDFLSENLSSCSSSGFKSLPRRTNTIQIHHTHSSSSSSRFQTLIKTIKNNVSFFKITKSPSTMLSLPRTLSRKLSSKRRTTRTSQRCKGEREIEIEISTVKIKDIIRWKSFRDLQPSVPLPPLDFNRYVTESSTVTTATTTCSSSDGGSSWSDGDFFSDLWEAQNDGVEESKKSSFLSFFVGKDSVAPSFVGTKEDLTCQDEQQSPVSVLHVAENEFSIFDQSLANIERRKQKFKQTADKFESHVKFDFASLDGCLSLDENSYYDEEYKDDNKEEVDQKVERLDWVEEKANQLLHCVKAKCSSVEKCDDNFGIVLLDFFREELRGNRNQKRNSEEFELEIMKIAEDWINESFENAYDIVHVNKDAYIKEMDRRGQWNRFEEEQEEMVFEIEAAILRSLVDEIFDIDG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01288 426 Coils Coil 243 263 - -
Trre15g01288 426 PANTHER OS04G0572500 PROTEIN 6 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01288 Trre-Chr15 9969478 9974510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01288 12 422 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 32.184 2.89e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01288 - - psat:127075862 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01288 15 9969478 9974510 Trre15g01288 15 9969478 9974510 ECH