Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01272 ATGGAAGAGGACATGCATGGAAAGGCAATGGAAGAGATTATGAGAGGGTGTGAGTCTACTCACCAGCTTAAGCAACTACTACTGCTCAATAATCATGAGTTGACAAAAACAAAAACAACCTCAATATTTGTTGAACATGTTGTCAACAACATCCTCAATTCCTTTAACAATGTCCTTTTCCTATTGGACAAAGACAAACATAACAAAATAGTACAAAAGGATCACTTTTCTTCCATTGCTCCAATAATTAGATCTGTTGACTTGGAACAAAGTTGCAATCTGATGAATACTTCTACTGCCGTCAGAGGATCATATTACAAAAGAAGAAACACTACACAAACATGGGAGGAGGTGACAAAAATTCCAAAAGATGATGATGGGCATCGATGGAGAAAATATGGCCAGAAAAAGATCAACAATTCTCAATACTCAAGGAACTACTATAGGTGTACTCACAAGTATGATCAAAGATGCCTAGCAACAAAACAAGTGCATAGAATTCAACAAAAACCTCCCTTATATAAGACCACATATTATGGCCACCACACTTGTGGAAAATACTTGTCCAACCCTAACATCATACTTGATCCTAATAGTGACCCTATAAATTCCTCCATATTGCTTAGCTTTAACAACACATTCCCAAATCCAACAAAACAAGAATGTCCATTTTTATCATCATCATCATTATTATCAACATCACCATCTATTTCTTCATCACCTAATTCATTGGAGTATAAGGAGGATGTTCCCACCAAGGTTTTAAAAAACGTCCCGTTACCGTGA 786 0.3639 MEEDMHGKAMEEIMRGCESTHQLKQLLLLNNHELTKTKTTSIFVEHVVNNILNSFNNVLFLLDKDKHNKIVQKDHFSSIAPIIRSVDLEQSCNLMNTSTAVRGSYYKRRNTTQTWEEVTKIPKDDDGHRWRKYGQKKINNSQYSRNYYRCTHKYDQRCLATKQVHRIQQKPPLYKTTYYGHHTCGKYLSNPNIILDPNSDPINSSILLSFNNTFPNPTKQECPFLSSSSLLSTSPSISSSPNSLEYKEDVPTKVLKNVPLP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01272 261 ProSiteProfiles WRKY domain profile. 119 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g01272 261 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g01272 261 Gene3D WRKY domain 104 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g01272 261 SUPERFAMILY WRKY DNA-binding domain 120 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g01272 261 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 206 IPR044810 GO:0003700
Trre15g01272 261 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01272 Trre-Chr15 9841581 9843047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01272 8 184 WRKY Transcription Factor Family AT5G01900 35.676 2.39e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre15g01272 WRKY 3.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01272 - - mtr:25500948 302.367