Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01259 ATGCGGCTTGTTGTTCATGCAGAGAGAAGCAATCAAAGAGCTTTTGCTGTGATGAGGAGGCATGGTTTGTGTTTGAATCAAGATAAGAGAATTATTGACACAATTCCCGGTATTTATATATGGGATGTATTTGTTTATAGAACGAAATTAGCTGTCGTTGGTTTACATGGTCAACTAGAAGTCGACGTTGATTATTTACCTGGTAGCATGAGTTCGAATGGCGAACTGATTGCTACTAGTGTGATTGTTTCTGGTGGATATGAGAATGGTGTTGATCAAGGTGATTTTATTATTTATTCTAGTGATGGTGGTGAGGAAAAGAATTCGAGACAGATTTTTCATCAGAAGTTAGAAGGTGGGAACCTTGCTATGGAGAGAATTATGCATTATGGGATTGAAGTTAGGGTTATTCGTTGTGTACAATATGAAGGCACTGCTTCTGTGTTTGATAAGGTTTATTTTTATGATGGTTTGTATAGGATAGTTAAATATTGGGTGGATGGAAAATCTGGTTTTGATGTCTACAAGTTTAAGTTATTGAGAATCGATAGTCAAGCTAAGATGGATTGTGATGTTTTTAATCCTAGGTGTGTCTTATCTCCCGATATTTCCAACAAGAAGGAGAACGTCGTTATTAGGCTAGTTAATAATATTGATAGGAATCAGGACCCAATATATTTTGAGTATCTTCCGAGGGTTAGATTTTCGCCGTTTGTGTCTCATCAGAGCGAGAAGGAAATAGGTTGTGAATGTATCGACAGTTGTGTGGATGGATGCTTCTGTTGGAACAAAGTGGGTCTGACATGA 807 0.3755 MRLVVHAERSNQRAFAVMRRHGLCLNQDKRIIDTIPGIYIWDVFVYRTKLAVVGLHGQLEVDVDYLPGSMSSNGELIATSVIVSGGYENGVDQGDFIIYSSDGGEEKNSRQIFHQKLEGGNLAMERIMHYGIEVRVIRCVQYEGTASVFDKVYFYDGLYRIVKYWVDGKSGFDVYKFKLLRIDSQAKMDCDVFNPRCVLSPDISNKKENVVIRLVNNIDRNQDPIYFEYLPRVRFSPFVSHQSEKEIGCECIDSCVDGCFCWNKVGLT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01259 268 Pfam SAD/SRA domain 34 185 IPR003105 -
Trre15g01259 268 Gene3D - 14 194 IPR036987 -
Trre15g01259 268 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 9 265 - -
Trre15g01259 268 ProSiteProfiles YDG domain profile. 33 181 IPR003105 -
Trre15g01259 268 SMART G9a_1 28 185 IPR003105 -
Trre15g01259 268 SUPERFAMILY SET domain 194 261 IPR046341 -
Trre15g01259 268 SMART preset_2 200 268 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trre15g01259 268 Gene3D SET domain 195 267 IPR046341 -
Trre15g01259 268 SUPERFAMILY PUA domain-like 16 189 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01259 Trre-Chr15 9741060 9741866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01259 1 264 Su(var)3-9 homologs AT1G73100 34.409 3.66e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01259 K11420 - tpra:123885822 414.461