Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01256 ATGTTGAGAGATCATGATTCAAGCTACTCTGATTCTCTGCTTAATCGAAGGCACAATTTCTTCGATGAAACCCAACCGTTAAATAAGTTAGATAATTTGGAGTTTCTTGAAATACTTGGCGAAGGTGGTTTCGGTAGAGTTTTCAAATGTCATAATGTCGAAGATAATAGTATTGTAGCCGTAAAACAAATTTGTATTCGTGATAGTGACGATGCTGTTCCCGCTGCCATCATTAGAGAGATCTCCTTTCTTAAAGAATTAAATCATCCCAACGTTGTTAGGTTATTAGGTGTAATCAACAAGGGCACAAGATTTGTGAACCTAGTTTTTGAGTATCTTGATTGTAATCTTTCTCAATACATTAAAGAGAATCAATGCTGCGGTTCATGTTCATCTTTTAATGATCCCATGAATATAAAGAGTTTTTTGTATCAGATTCTGTCTGCAGTGAATTACTGCCATTGTCACGAGATTATTCACAGAGATTTGAAACCAACTAATCTTCTAATCGATCGTTCCGAAAAGATAATCAAGTTGGCTGATTTTGGTTTGGCCAGAGAGTTAGGAGATCCTGACATGAAGTATATTGAGGAGGTGGCAACTTCGTGTTATAGAGCACCTGAAATATTGTTTGAATGTGGTAAATATTCAACTCCAATTGATATTTGGTCTGTGGGCTGTATATTTGGTGAGATGTTACTTGGAAAACCAATACTCGAAGGAAAATATTGGATGAATGAATTAGAAATGATTTTTTGTATGTTCGGTACTCCTAAAGTGGAAACGTGGCCAGAGATCACTAAATTGTGTACTAACATTACAACCTATCCCAAATATGAACCAATGGACCTATCAACAATATTTTATGCTGTTGATCCAACCGGTCTTAATCTTCTAACCACAATGCTTTGCCTAAACCCAAATAAAAGAATTACTGCCGAAGCTGCTCTAAAGCATGCCTACTTTAATGACTTGGTCTTGCATCCAGTATGCCTTCTATTACTCTCTTACTGTATTATATTGTATGTCTCTTGCTGCTACTTCTTTAATTAA 1053 0.359 MLRDHDSSYSDSLLNRRHNFFDETQPLNKLDNLEFLEILGEGGFGRVFKCHNVEDNSIVAVKQICIRDSDDAVPAAIIREISFLKELNHPNVVRLLGVINKGTRFVNLVFEYLDCNLSQYIKENQCCGSCSSFNDPMNIKSFLYQILSAVNYCHCHEIIHRDLKPTNLLIDRSEKIIKLADFGLARELGDPDMKYIEEVATSCYRAPEILFECGKYSTPIDIWSVGCIFGEMLLGKPILEGKYWMNELEMIFCMFGTPKVETWPEITKLCTNITTYPKYEPMDLSTIFYAVDPTGLNLLTTMLCLNPNKRITAEAALKHAYFNDLVLHPVCLLLLSYCIILYVSCCYFFN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01256 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Trre15g01256 350 SUPERFAMILY Protein kinase-like (PK-like) 28 326 IPR011009 -
Trre15g01256 350 ProSiteProfiles Protein kinase domain profile. 33 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01256 350 FunFam CMGC family protein kinase 115 327 - -
Trre15g01256 350 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Trre15g01256 350 PANTHER CELL DIVISION PROTEIN KINASE 33 322 - -
Trre15g01256 350 Pfam Protein kinase domain 34 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01256 350 Gene3D Transferase(Phosphotransferase) domain 1 125 328 - -
Trre15g01256 350 SMART serkin_6 33 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01256 350 CDD STKc_CDK_like 34 322 - -
Trre15g01256 350 Gene3D Phosphorylase Kinase; domain 1 25 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01256 Trre-Chr15 9698510 9702036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01256 30 325 Core Cell Cycle Gene Families AT3G48750 46.465 2.36e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Trre15g01256 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01256 K02206 - gmx:100799974 297.745