Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01210 ATGGATATAGCTTTTAGCCTACCACAATCGAGAGTGGCTTTGACTGGTTTGGATTCTCGTGTTTTGTTTAGATGTAGAACCTTTGGATGTGGTTTTGTTTGTAATTCAAGGAATATTTTGAAAGGTTATTGTGGAAGAGAGTTCCGAGTTTCGAATTTGAAGTCGAATTTGTTGTGTAGGAGTAAACTTTTTAGGGGAAATAGGGGGGTTTGGTTGAAGTGTCGGGGAAATGATTCGTTTGATTATGATAATGGAAATGGTAGGAGTGTTGATAATTTCAAAGGTTTGAATGAGGATTCTGATTTGGTGTCTATTTCCGGTGCGGAATTGGGTGAACCGGTTGGAGAAGTTGGGGGTCAAGTAGAAGTAGAGGTACAAAGTGTGGATGAATTGAAAGAATTGTTGCAAAAGGCTTTGAAAGAGTTAGAAGCTGCTAGAGTGAATAGTATTGTGTTCGAGGAAAAGGTTAAGAAGATATCGGAGACTGCGATATCTTTGCAGGATGAAGCAGCAAGAGCTTGGAATGATGTTAATTCTACACTTGATGTTATTCAGGAAATTGTGTGTCAAGAATTTATTGCTAAAGAAGCTGTTCAAAATGCAACAATGGCTCTTTCTTTATCTGAGGCAAGGCTTCAAGTAGCTGCTGAGTCTTTGGAGGTTGCAAATGAAGATTATACTGTGCGAGGTTCAAATGAGAGTGATGGTGGTAAAGGTATTGGGCAAGAGGAGAAAGAGCGTGTGGTTGCTCTGGAAGATATCAAGGAATGTCAGACAAATTTAGCGTGTTGTGAGGCTGAGTTGAAGCGATTGCAAAGTAAAAAAGAGGAGTTGCAAAATGAAGTGAACAAGTTGCATGGCTTTGCTGAAAAAGCACAGTTGATTGCAGTTAAAGCGGAGGAGGATGTCACAGACATAATGCATTTGGCCGAGCAAGCTGTTGCTTTTGAACTAGAGGCTGCAAAACGTGTTAACGATGCAGAGATTGCATTTCAGAGAGCAAACAAGTCTGTCACTGGCATTAATGACGATGATACCACTGACACTCTACAAGTACAAGATGTTGTGGCCCTCCCCAAGGAGGAGAAATTGGTTCAACAATTTTCTGGTGATGCTGCTGTTATAGGAGAGCTCGAGTTATCAAGTAATGATGAGTCTTTGCTTGCTGCAGGATCACTAGAGACACAGTCTAATAAAACCAGCCAAATCTCAGAAGACATAACTCAATCTGATTATCTGAGTGATCATGATAATGGACAGTTGAGCTTAGACTCTTCTAAAGAATCTGAACTTGAAGTAGACAAGTCAAAAAATGTAGTTCAAACAAAAAAACAGGAAACACAGAAAGATTTGACTAGAGATAATGCACCATCTGCTCCCAAGACATCAATGAAGAAATCTTCCCGGTTTTTTCCCGCGTCATTTTTCTCTTCTAGCACAGATGAGATTGATTACTCACTAGCATCAGTTTTCAATGGTCTTGTGGAGTCTGCACAGAATCAATTACCGAAGCTGATTGTTGGGTTATTGTTAATTGGAGCAGGGGTCACCTTCTATTCCAACCGAGCAGAGAGGAGTTCTCAGCTGCTTCAGCAGCCTGAAGTCATTACAACCACTGTTGAAGAAGTTTCCTCAAGTGCTAGGCCTTTAGTTAGACAACTTAAGGAACTACCCAATAGAATTAAGAAAGTTATTGCATCGTTACCTGATCAAGAGTTGAATGACGAGGAAGGCTCCCTCCTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTCCCACTATTTCAAAAAATTCCTGGAGGCAGTCCTGTTCTTGGTTACTTGGCTGCTGGAATCTTGATTGGGCCTTATGGACTCTCCATCATTCGCAATGTTCACGGGACAAAATCAATAGCCGAATTTGGAGTTGTTTTCCTATTATTTAATATTGGTCTGGAGCTCTCTGTGGAAAGGCTTAGTTCAATGAAGAAGTATGTCTTTGGTTTAGGCTCTGCTCAGGTTTTGTTGACTGCCGCAGTTATTGGGTTGGTGGCTCATTATATTTGTGGCCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCGACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAAGCGAGAGCACATCGCGACATGGGCGAGCTACATTTTCTGTGTTGCTTTTTCAGGATTTGGCCGTTGTTGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCTAAAGGAGGGGTTGGCTTTCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAAGCTGCAGTTTCCATCACTGCCATAATCGCAGGTGGACGATTGCTCCTTCGACCTATATATAGGCAGATTGCAGACAATCAGAATGCAGAAATATTTTCTGCCAACACACTCTTTGTTGTTCTTGGGACAAGCCTTCTCACTGCCAGGGCAGGCCTGTCCATGGCTTTGGGAGCATTTTTGGCTGGTTTGCTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTAGGCCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTCTCTCAAATTTTCCAGTCATCATAGGGACACTGGGACTCTTGATATGTGGCAAGACCCTGTTGGTTGCTTTGATTGGCAAAATTTTTGGTATTTCAATCATATCTGCCATCAGAGTTGGGCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTCCTTGTTGTGGGAATTTCAATGGCGCTTACACCATGGTTGGGTGAAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAACATGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACAGATGATCTGCATGATCATATCATTATTTGTGGATTTGGGCGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGGCTTATTCCTTTTGTTGCACTAGATGTGCGAAGTGATAGAGTGGCTGTTGGGCGCTCCTTGGATCTCCCTGTGTACTTCGGTGACGCTGGTAGTCGAGAGGTCCTACATAAAGTTGGGGCCGGAAGGGCAAGTGCTGCAGCAATAACTCTAGATTCCCCTGGTGCTAACTATAGAACGGTTTGGGCTCTGAGCAAACACTTCCCAAATGTGAAGACCTTTGTTCGTGCTCATGATGTTACTCACGGATTGAATTTAGAAAAAGCTGGAGCTACTGCCGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCGGCAGCAGTGCTTTCTGAGGTTAAACTTCCTGCATCAGAGATTGCAGCAACAATTAATGAATTCAGATCCCGTCATCTGGCTGAGCTTACAGAACTATCTGAAACAAGTGGAAGTTCTCTTGGATATGGATATAGCAGAATGATGAGCAAACCCAAATCCCAATCTCCCGATATAATTGATGACGCCCAAGTCCCTGAAGGGTCGACATGA 3549 0.428 MDIAFSLPQSRVALTGLDSRVLFRCRTFGCGFVCNSRNILKGYCGREFRVSNLKSNLLCRSKLFRGNRGVWLKCRGNDSFDYDNGNGRSVDNFKGLNEDSDLVSISGAELGEPVGEVGGQVEVEVQSVDELKELLQKALKELEAARVNSIVFEEKVKKISETAISLQDEAARAWNDVNSTLDVIQEIVCQEFIAKEAVQNATMALSLSEARLQVAAESLEVANEDYTVRGSNESDGGKGIGQEEKERVVALEDIKECQTNLACCEAELKRLQSKKEELQNEVNKLHGFAEKAQLIAVKAEEDVTDIMHLAEQAVAFELEAAKRVNDAEIAFQRANKSVTGINDDDTTDTLQVQDVVALPKEEKLVQQFSGDAAVIGELELSSNDESLLAAGSLETQSNKTSQISEDITQSDYLSDHDNGQLSLDSSKESELEVDKSKNVVQTKKQETQKDLTRDNAPSAPKTSMKKSSRFFPASFFSSSTDEIDYSLASVFNGLVESAQNQLPKLIVGLLLIGAGVTFYSNRAERSSQLLQQPEVITTTVEEVSSSARPLVRQLKELPNRIKKVIASLPDQELNDEEGSLLDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKSIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAAVIGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERSESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVSITAIIAGGRLLLRPIYRQIADNQNAEIFSANTLFVVLGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIIGTLGLLICGKTLLVALIGKIFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLGEGGQLIASRFEQHDVRSLLPVESETDDLHDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRSLDLPVYFGDAGSREVLHKVGAGRASAAAITLDSPGANYRTVWALSKHFPNVKTFVRAHDVTHGLNLEKAGATAVVPETLEPSLQLAAAVLSEVKLPASEIAATINEFRSRHLAELTELSETSGSSLGYGYSRMMSKPKSQSPDIIDDAQVPEGST 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01210 1182 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 163 1168 - -
Trre15g01210 1182 MobiDBLite consensus disorder prediction 421 451 - -
Trre15g01210 1182 ProSiteProfiles RCK N-terminal domain profile. 988 1110 IPR003148 GO:0006813
Trre15g01210 1182 MobiDBLite consensus disorder prediction 1156 1182 - -
Trre15g01210 1182 Coils Coil 254 288 - -
Trre15g01210 1182 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 587 867 IPR004771 GO:0006812|GO:0008324|GO:0016020
Trre15g01210 1182 MobiDBLite consensus disorder prediction 409 465 - -
Trre15g01210 1182 Pfam Sodium/hydrogen exchanger family 586 956 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre15g01210 1182 FunFam K(+) efflux antiporter 2 chloroplastic 576 962 - -
Trre15g01210 1182 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 985 1126 IPR036291 -
Trre15g01210 1182 FunFam K(+) efflux antiporter 2 chloroplastic 984 1148 - -
Trre15g01210 1182 Gene3D - 577 961 IPR038770 -
Trre15g01210 1182 Gene3D - 985 1148 - -
Trre15g01210 1182 Pfam TrkA-N domain 989 1102 IPR003148 GO:0006813
Trre15g01210 1182 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01210 Trre-Chr15 9427684 9437439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01210 69 1181 Inorganic Solute Cotransporters AT4G00630 70.160 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01210 K03455 - gmx:100791174 1624.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01210 15 9427684 9437439 Trre15g01210 15 9427684 9437439 ECH
Trre13g02580 13 23723433 23748203 Trre15g01210 15 9427684 9437439 PCT