Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01172 ATGGAAGAGAGTGCTTCTGATTGTGATCTCGTTGCTGCTTCTGCGGAAGATTTGCTTGAAGAGGACGACGCCCATGTTGATGAGGGGAAAAGCAGAACACCCTCATCTTTGGAGAAACATGTGCTGCTTTTTCCACCCACATCTGATTCAAATTATACCTTAGGGGCTCCTGAGGAGTTTAATGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTAATTGTCCTATTCAAGTAAAATGTGTGAACATTGTAATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTGAGGTATCCAAGCCTCGACTCTCTTTGCACGCACTTCAACGACCAAAGCTTTTGGAAGAAAATCCCTGAACTTGATGAGAAGTACGTGATGGGAGTTGAATTCGCCATCAAGACACTTTGCAGGAGCATCACTACCGAGGAATTTGCTCAAAAAAGAAACTCATGGAGCTTCTGGGCCTCTGCTACTAAAGAAAACTTTCAAAACCATAACAGTCCACCAGTTCCAGTCATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCCGAACTCAAGTTCTCGGCGGGTATGATGCAGTGGGGACAACGCCGGCAAGTTCGGTACTTGGGCCGTTGTGAGGAGCAAAAGGTTGAATCTTTACGTAAACTTCATAAGGAAAAAGGAGTCATTTTTGAACCCAGTGAAAGAACTAATAAGAAGAAAAGAAAGAATGTTGAAGAAGAAATGGTGGCTGTAAAGGTGGCTCCTTTAGGGGTACCGAGGATGACTCGTGAATGCAAGAAAAACCAAGGTGTGAGTAGTAGCAGCGGGGCTAAAAAGTCTATGAAAGCAGTAAACGAGACCAAGAAGCAGCAACTCATCGTTTATGGCAAAAAGAAGCGAAAAATATCTATTGACAGGTGGTCTGCTGAGAGGTATAAGCTGGCAGAGGAGAGCATATTGATGGTTATGAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAATATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGTGTTGAAAGATTCAGAAGGCGACACAATGCGGAAGGCTTAATGGAATACTGGTTAGAGAGTGCTGATCTTGCTGATATCAGAAAGGAAATGGGTGTCCAAGACCCTTACTGGACTCCTCCTCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACTAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGAGCTTGCATCAAAGAAAGAAAAGGAAGCATTGGTCACTGTGGCTACTCCTAGTTCTTGTTTGTCAAGTTTGAATTTTAAGGACTGTGGTTCTCAGGTTTCTATGCAGGATATTTATTTGGAGCTGGTTCATAAAAAGGCTGAAATTGAAGAACAACTTAGAGAAATTTCTCTGGCTTTGATTGGCATGGAGGATCAACTGGGAAGGCTGAAAGAACCAATAATGTCAGAATCATTAACACCACAAAAGTTATTGCTAGGACCAGCATCAATGACAGAAAACATTCTGGAGAAGACAGCGGAGAAGGAAAAATGGAGTAATGACAAAGAAACAAAATCAGCAGACACACAAATGGTAGGAAGTATAGCAGTAGAGGACAGGGCAGCAAAGATAAGAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGTATGTCTCCGCATGTTGTGGCCAACCTTGATGAACACACTATGGTCCTAACCCCAGGCTCAGCTTCCTCTACTACCACCTCACCTCCCAAGCTTATCTGCAAATCTCAGACTCCTAACTTGCCATTATCCCTACCTTGCCCTTCTTCTCCTGTTAAGCCACTGGCAGAGAGGCGCGCTGTGAGCACAACTACTCTGGCACAAGTCACTGGACCATTTTCCCCTCCATTAGAGACCCCAAAATCCACAATCAATACTACCATCACCAAGAGCAGCTCTTCTATTAACCTTAATGAGACTCCTCTGGACTAG 2106 0.4359 MEESASDCDLVAASAEDLLEEDDAHVDEGKSRTPSSLEKHVLLFPPTSDSNYTLGAPEEFNVGRFYEIDHSNLPPNCPIQVKCVNIVMVSGTGEGQVYLRYPSLDSLCTHFNDQSFWKKIPELDEKYVMGVEFAIKTLCRSITTEEFAQKRNSWSFWASATKENFQNHNSPPVPVINDAATSLVSKQGSCWSELKFSAGMMQWGQRRQVRYLGRCEEQKVESLRKLHKEKGVIFEPSERTNKKKRKNVEEEMVAVKVAPLGVPRMTRECKKNQGVSSSSGAKKSMKAVNETKKQQLIVYGKKKRKISIDRWSAERYKLAEESILMVMKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLADIRKEMGVQDPYWTPPPGWKPGDSISPDHVTSNEIRKIKEEINKLKRDMQELASKKEKEALVTVATPSSCLSSLNFKDCGSQVSMQDIYLELVHKKAEIEEQLREISLALIGMEDQLGRLKEPIMSESLTPQKLLLGPASMTENILEKTAEKEKWSNDKETKSADTQMVGSIAVEDRAAKIRRLKSGFQICKPRGTFMWPNMSMSPHVVANLDEHTMVLTPGSASSTTTSPPKLICKSQTPNLPLSLPCPSSPVKPLAERRAVSTTTLAQVTGPFSPPLETPKSTINTTITKSSSSINLNETPLD 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01172 701 MobiDBLite consensus disorder prediction 661 701 - -
Trre15g01172 701 Coils Coil 492 512 - -
Trre15g01172 701 Coils Coil 431 458 - -
Trre15g01172 701 PANTHER PROTEIN DYAD 57 696 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01172 Trre-Chr15 9139369 9143560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01172 302 391 PHD Transcription Factor Family AT5G22260 36.170 2.31e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01172 - - mtr:25502410 832.787