Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01171 ATGATTATGGAAGAGAGTGCTTCTGATTGTGATCTCGTTGCTGCTTCTGCGGAAGATTTGCTTGAAGAGGACGACGCCCATGTTGATGAGGGGAAAAGCAGAACACCCTCATCTTTGGAGAAACATGTGCTGCTTTTTCCACCCACATCTGATTCAAATTATACCTTAGGGGCTCCTGAGGAGTTTAATGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTAATTGTCCTATTCAAGTAAAATGTGTGAACATTGTAATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTGAGGTATCCAAGCCTCGACTCTCTTTGCACGCACTTCAACGACCAAAGCTTTTGGAAGAAAATCCCTGAACTTGATGAGAAGTACGTGATGGGAGTTGAATTCGCCATCAAGACACTTTGCAGGAGCATCACTACCGAGGAATTTGCTCAAAAAAGAAACTCATGGAGCTTCTGGGCCTCTGCTACTAAAGAAAACTTTCAAAACCATAACAGTCCACCAGTTCCAGTCATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCCGAACTCAAGTTCTCGGCGGGTATGATGCAGTGGGGACAACGCCGGCAAGTTCGGTACTTGGGCCGTTGTGAGGAGCAAAAGGTTGAATCTTTACGTAAACTTCATAAGGAAAAAGGAGTCATTTTTGAACCCAGTGAAAGAACTAATAAGAAGAAAAGAAAGAATGTTGAAGAAGAAATGGTGGCTGTAAAGGTGGCTCCTTTAGGGGTACCGAGGATGACTCGTGAATGCAAGAAAAACCAAGGTGTGAGTAGTAGCAGCGGGGCTAAAAAGTCTATGAAAGCAGTAAACGAGACCAAGAAGCAGCAACTCATCGTTTATGGCAAAAAGAAGCGAAAAATATCTATTGACAGGTGGTCTGCTGAGAGGTATAAGCTGGCAGAGGAGAGCATATTGATGGTTATGAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAATATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGTGTTGAAAGATTCAGAAGGCGACACAATGCGGAAGGCTTAATGGAATACTGGTTAGAGAGTGCTGATCTTGCTGATATCAGAAAGGAAATGGGTGTCCAAGACCCTTACTGGACTCCTCCTCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACTAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGAGCTTGCATCAAAGAAAGAAAAGGAAGCATTGGTCACTGTGGCTACTCCTAGTTCTTGTTTGTCAAGTTTGAATTTTAAGGACTGTGGTTCTCAGGTTTCTATGCAGGATATTTATTTGGAGCTGGTTCATAAAAAGGCTGAAATTGAAGAACAACTTAGAGAAATTTCTCTGGCTTTGATTGGCATGGAGGATCAACTGGGAAGGCTGAAAGAACCAATAATGTCAGAATCATTAACACCACAAAAGTTATTGCTAGGACCAGCATCAATGACAGAAAACATTCTGGAGAAGACAGCGGAGAAGGAAAAATGGAGTAATGACAAAGAAACAAAATCAGCAGACACACAAATGGTAGGAAGTATAGCAGTAGAGGACAGGGCAGCAAAGATAAGAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGTATGTCTCCGCATGTTGTGGCCAACCTTGATGAACACACTATGGTCCTAACCCCAGGCTCAGCTTCCTCTACTACCACCTCACCTCCCAAGCTTATCTGCAAATCTCAGACTCCTAACTTGCCATTATCCCTACCTTGCCCTTCTTCTCCTGTTAAGCCACTGGCAGAGAGGCGCGCTGTGAGCACAACTACTCTGGCACAAGTCACTGGACCATTTTCCCCTCCATTAGAGACCCCAAAATCCACAATCAATACTACCATCACCAAGAGCAGCTCTTCTATTAACCTTAATGAGACTCCTCTGGACTAG 2112 0.4351 MIMEESASDCDLVAASAEDLLEEDDAHVDEGKSRTPSSLEKHVLLFPPTSDSNYTLGAPEEFNVGRFYEIDHSNLPPNCPIQVKCVNIVMVSGTGEGQVYLRYPSLDSLCTHFNDQSFWKKIPELDEKYVMGVEFAIKTLCRSITTEEFAQKRNSWSFWASATKENFQNHNSPPVPVINDAATSLVSKQGSCWSELKFSAGMMQWGQRRQVRYLGRCEEQKVESLRKLHKEKGVIFEPSERTNKKKRKNVEEEMVAVKVAPLGVPRMTRECKKNQGVSSSSGAKKSMKAVNETKKQQLIVYGKKKRKISIDRWSAERYKLAEESILMVMKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLADIRKEMGVQDPYWTPPPGWKPGDSISPDHVTSNEIRKIKEEINKLKRDMQELASKKEKEALVTVATPSSCLSSLNFKDCGSQVSMQDIYLELVHKKAEIEEQLREISLALIGMEDQLGRLKEPIMSESLTPQKLLLGPASMTENILEKTAEKEKWSNDKETKSADTQMVGSIAVEDRAAKIRRLKSGFQICKPRGTFMWPNMSMSPHVVANLDEHTMVLTPGSASSTTTSPPKLICKSQTPNLPLSLPCPSSPVKPLAERRAVSTTTLAQVTGPFSPPLETPKSTINTTITKSSSSINLNETPLD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01171 703 MobiDBLite consensus disorder prediction 663 703 - -
Trre15g01171 703 Coils Coil 494 514 - -
Trre15g01171 703 PANTHER PROTEIN DYAD 59 698 IPR044221 GO:0007131|GO:0051177|GO:0051321
Trre15g01171 703 Coils Coil 433 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01171 Trre-Chr15 9139369 9144268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01171 304 393 PHD Transcription Factor Family AT5G22260 36.170 2.30e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01171 - - mtr:25502410 832.787