Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01165 ATGGCAAAGAAGTCCCAAAGACGCACTGTGCGGTATGAGAAAGATAAGTCGGGATGTATGTGGGGATTTATTAGTATGTTTGATTTTCGCCATGGTCATTTGACTAGGAAGTTGATTGCTGATAAGAGGCAAAGCACCAAGCACTCCGGTGGTGTTGTACATTCTAAGAATAAGTTTGAGGTGTTAAACGATATAGACGAAGTTTGTCAAGACACTTTTGATGGTGTAGAGAGTAAAAGACCAACGGTGAGAACTATTATTAATAAGCCGAGTGTGAAGAAACTTATAGAAGAAGAGATGTTCACTGATCAAAATGCAATGAAGGATATAGATAATTCTGAAAGGCGTGAAGTTTTCCGGAAGTTAGATTCCAAAAGAAAAAAGAAATCGTGTGAGAAAAAACACGATATCACCGGTGATTTAAATTTTGATGCAACATCAAAATCTGAAACTTCGCATTGTCAGCACTCAAGGAAGCAATCTAAAGATAATCTTGATGTGGATACAATAATCGAAGAGTTTTGTAATCTAAAAGGTGTTCGTTCCATGATACATGGCAATGATGGAGAAGTAGAAAAGCATGCACAACCAAACCAGAAACAGAAGAATGCTGCTTCCGGAAATAATTCAAGAGATGCAATTCGTGAATTTGTGAATCAGATGATATTGAACGGAAAAGATCCGGTGGAAGCTAGAAAATTTCTTTTCTCTGATGAATTAATGGAAGCATTTCAGCTTATAAGTTCAGATAAGGAATTGTTTCTTGCATTTCTACAAAATCCAAATCCACTTGTATTGAAATGTGTTCAAGAGTTTGAGAATTCTCAGCGGGAGAACGACGACGAATATAGTCGTGTTACAGGCTGCAAATTCTCGGAACAAGATCACGGCAATAAAGAACAAACTAGTGAGATTGTTAACCAGAAGAAGCATAACTTTTTCAGGAAAAAGGTGAAGTCTCAATCAAAAAGTTCAACAAATGAAAATGGAAATACCACCGGCATTTCAAATAAAATTGTTATTCTAAAGCCAGGACCAAATGCATCGGAAAATTTAAAAACCGGAAACAACCTTGCTTCGTCTCTAGATTCTCACGATACTGTCAAATACAGTAGTCCTTCTGAGAGAGGTAGTTCACATTTTTCACTTACCGAGATAAAAAAAAAATTAAAGAATGCGATAGGAAGGGAGAGACATGGAAAAGGCATTGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTGCAAGACCTTCAACCGATGTTACTAAAGGAGACAAGACTGGTAATGAAGATGAAAACACGGACTCGTCAAGTAGGCTAACTTCCAAAACGCTCGGAAGAATAATATCTTTTCCTGATTACAACTTTTCTCCACTTAACAGTCCTGGAAGGGATTGGGAGGATCGTTTTGTGACCGCAAAGAGGAGACTTCATGGTGAAAGCTATAACAATAAGTCACAAGAAATTAAGCCAGACTCGAATTTCTCAGACGGTATAATTAGCGTTGATAAAGAAGAAAATAAGGATGAGATAGTTACTGAAGGTGATGTAGAATCTACAAAAGACGTAACTATTATAGAATCTTCCTCGGAACCAGTTGACCTCAGTGCAAGAAATGAGGAACAATGCCATAATATCTCCGAAAGTTCTGATTGTGCGGGATTTTCTCAATGTTTGGAGCAGGATGTAACAGAAGAAAACCAATCATCTTCTCCACTTTCATCGACATCTCACTCTTCAATCACTAGGGAAACTAAAGAGCAAGAGATTGTCACTGATGTGTCTGCGCGACCAAGTCCAGTGTCTGTTCTTGATGCACCATTCTTAGAGGATGATGCCACCTCTGTGAACTCTAGATGTCAACGTGCTGAAGTATCGGTGCAGCCACTACATGTTCAATTTGAAGAGCAAGATTCTTCTCTTGTGAACGAAATCAAGAGAGCAAAATATTGTATCGAAGAAAATGAATCGATATATGGTTACATCGAAGCAGTCCTGCGAACCTCTGGATTGACAAGAGATCAATTGTTGATGAAATGTCTTTCCTCCGACAAGATACTCGATCCTTCCTTGTTTGATCAGGTAGAATTATCACCGAACCAGCTTTGCCATGACTCGAAACTCCTATATGACTGTATAAATGAAATTCTCATGGAGGTTTGTTGCGATTACTTTGGTGCCTCGCCTTTTGTATCTTTTGTAAGTCCTATTATAAAGCCAACTCCAAATATGAAAACGGTTATTCTCATGGTCTCGGAAGGAGTGTGTTGGCATTTACTTCTCTTATCCCCGCCACACACGTTGGACAAAATTGTTCGGAAAGACATGGAAAAATGTGGAGCGTGGATGGACCTTCGATTTGAAGCCGAAACAGTTGGTTTTGAATTAAGCAATGCCATTCTAGAAGAACTGATGGAAGATACTATACTTAGCTGTTGGATCCCTTCACCTTCACCCTTTATTCATACCAGAGGAAGCAACAACAACAACAGAGGCATCATCGTCGTCTTCATCTCTAAAATCTCAGAGTCAAACTTCTTCAATTACTTTCATACCCTTTTTCTCTTTCTCTCTCTTCAACCCTTTTCTTCAAAGCTCGATTTTTTTTCTTCTCTTCTCAGTTAA 2652 0.3835 MAKKSQRRTVRYEKDKSGCMWGFISMFDFRHGHLTRKLIADKRQSTKHSGGVVHSKNKFEVLNDIDEVCQDTFDGVESKRPTVRTIINKPSVKKLIEEEMFTDQNAMKDIDNSERREVFRKLDSKRKKKSCEKKHDITGDLNFDATSKSETSHCQHSRKQSKDNLDVDTIIEEFCNLKGVRSMIHGNDGEVEKHAQPNQKQKNAASGNNSRDAIREFVNQMILNGKDPVEARKFLFSDELMEAFQLISSDKELFLAFLQNPNPLVLKCVQEFENSQRENDDEYSRVTGCKFSEQDHGNKEQTSEIVNQKKHNFFRKKVKSQSKSSTNENGNTTGISNKIVILKPGPNASENLKTGNNLASSLDSHDTVKYSSPSERGSSHFSLTEIKKKLKNAIGRERHGKGIGKDNVGMRSPNKDHFFIEKIARPSTDVTKGDKTGNEDENTDSSSRLTSKTLGRIISFPDYNFSPLNSPGRDWEDRFVTAKRRLHGESYNNKSQEIKPDSNFSDGIISVDKEENKDEIVTEGDVESTKDVTIIESSSEPVDLSARNEEQCHNISESSDCAGFSQCLEQDVTEENQSSSPLSSTSHSSITRETKEQEIVTDVSARPSPVSVLDAPFLEDDATSVNSRCQRAEVSVQPLHVQFEEQDSSLVNEIKRAKYCIEENESIYGYIEAVLRTSGLTRDQLLMKCLSSDKILDPSLFDQVELSPNQLCHDSKLLYDCINEILMEVCCDYFGASPFVSFVSPIIKPTPNMKTVILMVSEGVCWHLLLLSPPHTLDKIVRKDMEKCGAWMDLRFEAETVGFELSNAILEELMEDTILSCWIPSPSPFIHTRGSNNNNRGIIVVFISKISESNFFNYFHTLFLFLSLQPFSSKLDFFSSLLS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01165 883 MobiDBLite consensus disorder prediction 319 338 - -
Trre15g01165 883 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
Trre15g01165 883 MobiDBLite consensus disorder prediction 425 446 - -
Trre15g01165 883 MobiDBLite consensus disorder prediction 139 162 - -
Trre15g01165 883 MobiDBLite consensus disorder prediction 349 380 - -
Trre15g01165 883 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 821 - -
Trre15g01165 883 MobiDBLite consensus disorder prediction 425 450 - -
Trre15g01165 883 MobiDBLite consensus disorder prediction 191 211 - -
Trre15g01165 883 MobiDBLite consensus disorder prediction 572 590 - -
Trre15g01165 883 MobiDBLite consensus disorder prediction 317 383 - -
Trre15g01165 883 Pfam Domain of unknown function (DUF4378) 670 816 IPR025486 -
Trre15g01165 883 MobiDBLite consensus disorder prediction 572 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01165 Trre-Chr15 9078078 9089322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01165 1 806 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.180 1.03e-109 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01165 - - tpra:123883590 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01165 15 9078078 9089322 Trre15g01165 15 9078078 9089322 ECH
Trre13g02540 13 23248824 23252427 Trre15g01165 15 9078078 9089322 PCT