Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01161 ATGGCTTTGGTAAGTTCTATGAACTCAATTATGGTTAATCCAAGTGAGGTTAGTGACACAATTTATGTTGCTGTGGCTAAAGATGTGAAAGATAGTAAATTAAATGTGATATGGGCAATACAAAATTCTGGTGGAAAGAGTATTTGTATTCTTCATGTGCATGTGCCAGCTCCAAAGATCCCTATGATGGGAGCTAAATTTCCAGCAAATGCATTGACAAGGCAAGAAGTTAAAGCATACAGGGAAATTGAAAGTCAAGACATGCATAAGACTCTTGATGCTTATCTTCTTATCTGTCAAAGAATGGGGGTGAGGGCAAATAAATTGCACATTGAAATGGATTGCATTGAAAAAGGGATTATAGAACTTATATCCCAACATAACATACAAAACCTTGTAATGGGAGCAGCTTCTGATAAGTACCATTCTAGGAGAATGACAGGTCTAAGATCTAAGAAAGCCATCTATGTATGGGAACAAGCTCCAGCTTCTTGTCATATACAGTTTATCTGCAAAGGGTATCTTATACAAACAAGGGATTGCAGTTTGGATAAACTTAGAGTAGAGGGCACATCTCCATTGGCAAAGCAAATGCAAAACTCTGAAGTTGGTCACTCACCTCATCACTTAAGATCTAAATCAATCTCACATGATCAAGAGTTACTTCATCATAGAGTAGGATCTATGAGCTCAGTATCTGAAAGTGGAAGGAGCATAGCATCATCTGTTTCTTCTTCAGAATGGTTTTCAACTTCACAAAGCAAGTTTGATAAAGAACCAAGTTTGAGTCCTTCACCTTCATCAGTTGAAACTGCAGCAGCATTGAACACAAATTTGATTAGTATCAAAGAGGAGGATCTTTATCATTCATCACCTCCTAGTGTGCTGGATGGAGGAAGGGATGATAGTTTGTATGATCAACTTGAACAGGCTATGGCTGAGGCTGAGAAGGCTAGGCGGGATGCGTATCAAGAAACTGTTAGGCGTCGGAAAGCTGAAAAAGATGTCATTGATGCTTTACGCAAGACTAAAGACATCAAAATCTTGTACGAAGAAGAGGTGAAACTACGGAAAGACTTAGAGGAGGCGTTAGAGAAAGCAGAAGAAGAAATCGACAACATGAGACACGAAATAGAACAAGTCAATAAGGAACTCGAACTTGCCTTGCATCAGAAGTCATCAACAGAGAATCAAATTGGTGAACCCTCAAGAACACAATCTCTTCAACTTTTGTCAGAGTTTTCTTTTTCAGAGATTGAAGAAGCAACATGTAACTTCAATCCATCGTTAAAGATTGGTGAAGGCGGATATGGAAGTATATTTAAAGGCAGCCTTCGTCACACTGAAGTTGCTATAAAAATATTGAACCCTAACAGCACTCAAGGACCCTCAGAGTTTCAACAAGAGGTTACGGTATTAAGCAAGTTAAGGCATCCAAATCTTGTCACACTTATAGGAGCAAACCAAGAATCAAGGACTCTTATCTATGAATATTTACCAAATGGAAGCCTCGAGGATCATCTCAGCCGCAACGACAGTAATACCTCTCCATTATCATGGCAGACTCGAATTCGCATCGCGACAGAATTATGTTCTGCTCTAATTTTTCTCCATGCCAATAAACCTCACAGCATAGTGCATGCATTAGGAATAAAGAATGAAGTGTTAGATGCATTAAATAATGCTGATGGAGAATTGAAATCACTTTTGGATCCTTTAGCTGGAGATTGGCCTATTTCGGAAGCCGAAAATTTAATTCATTTGGCTTTAAGTTGCTGTGATATGAATAAAAGGAGAAGGCCAGAACTTTGTTCAGATGTGTGGAAAGTGTTGGAACCAACGAGAGCTTCTTGTAGTAGTGGCGCAATCGCGAACACTTTTGGTCTTAAGTCCTGTTTGGATAAACAACTTAATAGAACGACTTAA 1926 0.3889 MALVSSMNSIMVNPSEVSDTIYVAVAKDVKDSKLNVIWAIQNSGGKSICILHVHVPAPKIPMMGAKFPANALTRQEVKAYREIESQDMHKTLDAYLLICQRMGVRANKLHIEMDCIEKGIIELISQHNIQNLVMGAASDKYHSRRMTGLRSKKAIYVWEQAPASCHIQFICKGYLIQTRDCSLDKLRVEGTSPLAKQMQNSEVGHSPHHLRSKSISHDQELLHHRVGSMSSVSESGRSIASSVSSSEWFSTSQSKFDKEPSLSPSPSSVETAAALNTNLISIKEEDLYHSSPPSVLDGGRDDSLYDQLEQAMAEAEKARRDAYQETVRRRKAEKDVIDALRKTKDIKILYEEEVKLRKDLEEALEKAEEEIDNMRHEIEQVNKELELALHQKSSTENQIGEPSRTQSLQLLSEFSFSEIEEATCNFNPSLKIGEGGYGSIFKGSLRHTEVAIKILNPNSTQGPSEFQQEVTVLSKLRHPNLVTLIGANQESRTLIYEYLPNGSLEDHLSRNDSNTSPLSWQTRIRIATELCSALIFLHANKPHSIVHALGIKNEVLDALNNADGELKSLLDPLAGDWPISEAENLIHLALSCCDMNKRRRPELCSDVWKVLEPTRASCSSGAIANTFGLKSCLDKQLNRTT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01161 641 FunFam receptor-like protein kinase FERONIA 389 498 - -
Trre15g01161 641 CDD STK_N 20 173 - -
Trre15g01161 641 ProSitePatterns Protein kinases ATP-binding region signature. 432 453 IPR017441 GO:0005524
Trre15g01161 641 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 37 148 - -
Trre15g01161 641 Coils Coil 346 398 - -
Trre15g01161 641 Gene3D Transferase(Phosphotransferase) domain 1 409 615 - -
Trre15g01161 641 Coils Coil 301 325 - -
Trre15g01161 641 Pfam Protein tyrosine and serine/threonine kinase 431 547 IPR001245 GO:0004672|GO:0006468
Trre15g01161 641 SUPERFAMILY Protein kinase-like (PK-like) 402 547 IPR011009 -
Trre15g01161 641 ProSiteProfiles Protein kinase domain profile. 426 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01161 641 PANTHER OS02G0152300 PROTEIN 549 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01161 Trre-Chr15 9045273 9049974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01161 548 628 U-box Gene Family AT2G45910 54.321 1.66e-17 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre15g01161 PK_Tyr_Ser-Thr 5.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01161 - - tpra:123883511 868.611