Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g01099 | ATGTCTTCCTCAAACCCTTTCTCTCCATCACCACCACCACCACCACTTCCTTACCTCACCAATCTCGGCTTCGGTTACTCCATAGCCATAGCTCTCGGTTTTCTCTTCCTTCTTTCAACTTTAATCCTCTCTTCTTATCTCTGTTGTCGCACTTTCCGTAACCGTCATAATAACAATAACAACCGTCGCAACAACAACAACCATCAATCTAATGACGACGGCGTTGTTTTACCTCGTGTGATTTTTGTAGCAGAAGAAGATGAAGATCGAGAAGATGTTGTTTTAGGTTTGGATCAGAATGTGATCAATTCGTATCCGAGGTTACAATATGGGAAAGATTTAGGACATGACAGTACTTGTTCGATCTGTTTATGTGAGTATAAGGATTCTGAGATGTTAAGGATGATGCCCGAATGTAGACATTATTTTCATCTTTGTTGTCTTGATTCTTGGTTGAAACTTAACGGTTCTTGTCCCGTTTGTCGAAATTCTCCTATGCCTACTCCGTTATCTACGCCGTTACAAGAAGTTGTTCCTCTTTCTCATTACATTGGTGAAAGAAGGGTAAGAAGGTGA | 576 | 0.408 | MSSSNPFSPSPPPPPLPYLTNLGFGYSIAIALGFLFLLSTLILSSYLCCRTFRNRHNNNNNRRNNNNHQSNDDGVVLPRVIFVAEEDEDREDVVLGLDQNVINSYPRLQYGKDLGHDSTCSICLCEYKDSEMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSHYIGERRVRR | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g01099 | 191 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 13 | 189 | IPR044289 | GO:0016567|GO:0016740 | |
Trre15g01099 | 191 | Pfam | Ring finger domain | 119 | 162 | IPR001841 | - | |
Trre15g01099 | 191 | ProSiteProfiles | Zinc finger RING-type profile. | 120 | 162 | IPR001841 | - | |
Trre15g01099 | 191 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 167 | IPR013083 | - | |
Trre15g01099 | 191 | SMART | ring_2 | 120 | 161 | IPR001841 | - | |
Trre15g01099 | 191 | SUPERFAMILY | RING/U-box | 105 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g01099 | Trre-Chr15 | 8532295 | 8532870 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g01099 | 17 | 184 | C3H Transcription Factor Family | AT5G07040 | 38.372 | 2.49e-36 | 122 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g01099 | - | - | vra:106773185 | 254.988 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Trre15g01099 | 15 | 8532295 | 8532870 | Trre15g01099 | 15 | 8532295 | 8532870 | ECH | |
Trre13g02448 | 13 | 21952040 | 21952600 | Trre15g01099 | 15 | 8532295 | 8532870 | PCT |