Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01097 ATGAACATTTTTCCTACCATACTCATTATTGCTAACATACTATTTTTCTTCTCCAAAATTTCATCTGCAAAAGATACCATTACACAATCACAATCACTTCCCGATGGAAGCACCTTGGTTTCTAAGGATGGAATATTTGAGTTGGGTTTCTTCAATCTTGGTGATTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATATTCCTGATAGAAGAGTTGTTTGGGTTGCTAATCGTGACAATCCAATAAAAGACAATTCTAGCAAATTGATCATAAGTCGAAATGGAAACCTTGTACTTCTAAATCAAAATCAAACACTTCTATGGTCAACAAAGACGACGACAACAACAACAACAAATGTTACAATTTCAAGTCCAATTGTGCAACTTTTGGACAACGGAAATTTAGTACTTAAAAACGAGAACAAAGACAACAACCCTGATGAAATTTTTTTATGGCAAAGTTTTGATTATCCTTGTGATACAGTATTACCAGGAATGAAAGTGGGATTGGACAAAAAAAAGGGTCTTGATAGGTATCTCATTGCATGGAAAAATTGGGATGATCCATCTTCAAGTGATTTTACTTCAGCTTTAGTACAAACTCCTAATCCTGAAAGTTTTATTTGGAAAGGCTCAACAAAAATCTATAGGACAGGACCATGGACTGGTCCTAGATCTAGTGGAATAGTTGGATTAACAACAAATCCACTTTATGATTATGAATTTATCAACAATGAAGATGAATTGTATTATATGTACACACTCAAGAATAGTTCTTATATTTCTATAGTTGTTTTGAACAAAACAAATTCTAATCGACAACGTCTCATTTGGGTTTCAGATTCCAAAAAATGGAATAATTACTTAACCTTACCACAAGATAATTGTGATGATTATAATGTTTGTGGAAATAATGGGCTTTGTACACTTAATGAATCACCTATTTGTCAATGTTTAGATGGATTTAAGCCGAAGTCGCCGCAACAGTGGAATGCAATGGATTGGAGACAAGGATGTATGCGTAATGGTAATTGGAGTTGTGGAGTTAAACATCGAGATGGGTTTAAAAGAATTGTTGGGATGAAATTGCCAGATACTACACATTCTTGGATTGATGAGAAAATGTCACTTAAAGATTGCAAGGATAAATGTTTGAAAAATTGTTCTTGTAGTGCTTACTCAAGTTTAGAATCAACTGGAACAGGTAGAGGTTGTTCAATCTGGTTTGGTGATCTTATTGATCTTAGAGTTTCAGCGAGTGGACAAGACCTATATATTCGAACAGACTCGCCAAATATAGGTGATAAAAATGGGCAAATAAAAAAAGCTGTATTGGCAGTTTCAATTCCAATTTCAGTAGTCCTTGTGATGTTATTGGCATTCACCTACATATATATAACAAAGGCAAAGTATAAAAAAAACACCACAAGGTCAGAAGAGAAAGAAGAAGATAAATACGAAGATTTTGAGCTTCCTATCTTTGATCAAGCTACAATACTCAAGGCAACAAATAACTTCTCTTTTGACAACAAGCTCGGTGAAGGTGGTTTTGGACCGGTATATAAGGGTACATTGCTCGATGGACAAGAAATTGCTGTCAAAAGGCTTTCGAGGAGTTCTGGTGGGGAGAAAATGTTGGTCTATGAATACATGTCCAACAAAAGTCTAGATTCATTTCTTTTTGATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAGATTGAGGGGAGAACAGACAAAATAGTAGGCACATATGGCTATATGGCACCAGAATATGCCTTTGATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGTGTATTATTATTAGAAATTATCAGTGGAAAGAAAAATAGAACACATAGCTATCTGGAGCACGATCATAATCTTATTGGATATGCATGGAGGTTGTGGAAAGAAGGCAGGCCACTTAATTTGATCGATTATAATTTGAGCAATTCATGTATTGAATCTGAAGTTGTACGTTGCATTCAAATTGGTCTACTATGCCTACAACATCATCCCGATGATAGACCAAACATGACATCTGTGGTTGTGATGCTGAGTAGCGAAAATACTTTACCAAAACCAAAGGAACCCGGTTTCTTAATTAAAAAGTTTCCAGTTGATGGAGAATCTTCTTCAACAAATGAAATAACTATTTCACTCATAGACGCTAGATAG 2193 0.3502 MNIFPTILIIANILFFFSKISSAKDTITQSQSLPDGSTLVSKDGIFELGFFNLGDSTNRYVGIWYKNIPDRRVVWVANRDNPIKDNSSKLIISRNGNLVLLNQNQTLLWSTKTTTTTTTNVTISSPIVQLLDNGNLVLKNENKDNNPDEIFLWQSFDYPCDTVLPGMKVGLDKKKGLDRYLIAWKNWDDPSSSDFTSALVQTPNPESFIWKGSTKIYRTGPWTGPRSSGIVGLTTNPLYDYEFINNEDELYYMYTLKNSSYISIVVLNKTNSNRQRLIWVSDSKKWNNYLTLPQDNCDDYNVCGNNGLCTLNESPICQCLDGFKPKSPQQWNAMDWRQGCMRNGNWSCGVKHRDGFKRIVGMKLPDTTHSWIDEKMSLKDCKDKCLKNCSCSAYSSLESTGTGRGCSIWFGDLIDLRVSASGQDLYIRTDSPNIGDKNGQIKKAVLAVSIPISVVLVMLLAFTYIYITKAKYKKNTTRSEEKEEDKYEDFELPIFDQATILKATNNFSFDNKLGEGGFGPVYKGTLLDGQEIAVKRLSRSSGGEKMLVYEYMSNKSLDSFLFDFGMARMCGGDQIEGRTDKIVGTYGYMAPEYAFDGLFSIKSDVFSFGVLLLEIISGKKNRTHSYLEHDHNLIGYAWRLWKEGRPLNLIDYNLSNSCIESEVVRCIQIGLLCLQHHPDDRPNMTSVVVMLSSENTLPKPKEPGFLIKKFPVDGESSSTNEITISLIDAR 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01097 730 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 682 - -
Trre15g01097 730 ProSiteProfiles Protein kinase domain profile. 394 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01097 730 Pfam Protein tyrosine and serine/threonine kinase 563 690 IPR001245 GO:0004672|GO:0006468
Trre15g01097 730 SMART blect_4 30 159 IPR001480 -
Trre15g01097 730 SMART ntp_6 351 429 IPR003609 -
Trre15g01097 730 Gene3D - 18 156 IPR036426 -
Trre15g01097 730 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Trre15g01097 730 CDD B_lectin 30 159 IPR001480 -
Trre15g01097 730 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Trre15g01097 730 Pfam D-mannose binding lectin 73 185 IPR001480 -
Trre15g01097 730 SUPERFAMILY Protein kinase-like (PK-like) 491 698 IPR011009 -
Trre15g01097 730 ProSiteProfiles PAN/Apple domain profile. 348 430 IPR003609 -
Trre15g01097 730 Pfam PAN-like domain 348 416 IPR003609 -
Trre15g01097 730 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Trre15g01097 730 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 190 IPR036426 -
Trre15g01097 730 Pfam Domain of unknown function (DUF3403) 692 730 IPR021820 GO:0004674
Trre15g01097 730 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 571 696 - -
Trre15g01097 730 PIRSF SRK 540 563 IPR024171 GO:0004674
Trre15g01097 730 PIRSF SRK 563 730 IPR024171 GO:0004674
Trre15g01097 730 PIRSF SRK 1 545 IPR024171 GO:0004674
Trre15g01097 730 Gene3D Phosphorylase Kinase; domain 1 476 548 - -
Trre15g01097 730 Gene3D Transferase(Phosphotransferase) domain 1 549 701 - -
Trre15g01097 730 CDD PAN_AP_plant 347 429 - -
Trre15g01097 730 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 156 - -
Trre15g01097 730 Gene3D Hepatocyte Growth Factor 347 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01097 Trre-Chr15 8518263 8522192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01097 431 708 Receptor kinase-like Gene Family AT4G23230 37.432 1.07e-63 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g01097 PK_Tyr_Ser-Thr 9.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01097 - - tpra:123915292 1090.1