Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01090 ATGGATTACGAACCAGAATTTCTCTATCCAATTAGTAAGAAGGATATGGAAACTGTCAAGTACTACTTCGACAACGAAACAGAATTCATGCCCGCAAGAAACTTCTTCACAAATGATCTCAACATTCTCTACCGCATGCATGCCGTTTCAGTAATCGCTAAGGTCACAAAGAAGGATGATCCAGATGCTTATGTTCCGTATCTTGCTATGAACTACTTTGATCGCTTCATATGCCGTTGCGACATGAGGCGTGTCGAAGGTCAGACTGATACCGAAAAAGTTTGTTTGATTGCTATATCTTGTTTCACCTTATCTGCCAAGATGAGGACAGAGTCATTCTCGGTTGAACATTTTCTGTTTGACCTAGATAGGGACATGAATCTGAACATAACTCAACGCAGTGTAATGAGAATGGAGGGTCTCATTAAAAAGAAACTTGATTGGAAAATGAAATCTGTAACTGCCTTCTGTTTTCTGAACCACTATTATGCTTACTTCAAACCACTCGGTGGTTTTAAACGTCGTAGCATTAATGAGATCATAGTTCAAGCTCAAGGATTGCACACCTTCGTTGATTTCATGCCTTCGGAAGTTGCGCTCTCCGCTTTTGCTGCTGCTGCTACAATTGCATATCCCAAAAATAAGATTGCAAAAGACATTAAAAGAATGATGAGCCCTAAAGTGAAGGAATGTATAACGATGATGGTAATTCTTTGCGATAGCATGAAAATCCAGATTGATACCTCTAGATCATCTGAAGATGTAGAAGAAGAAGATAGGACTGCATTAATCGACAAGCGAAGACAGGACATGGGCAAGACGGAGACTTCTCAATTGCAGATGAAGGTGAAGCTGGAGGAGTTATTTGATAAAAAAGATGCAGCAGCAGAAGAGACTGATGCAGAAAAACGAAGTCTGGCCAAGTGTAAGGGAAAAGGCAAGGCAGTGGAAAAGGTTAAGCAGCCACAGCCACAGGTGGAGGGATACATTTCAGAGATTGAACCAAAGAAGTTTATGAACTTTGAGCTGAAATGGGAAACTGATGTTCCATCACTAGAAGTAGGAATAGGACACCCGCCGCCACGAGAGTCTACAGGTATAAGCCTTAAGATACCAGGGACTGGAATTAATATAAATTTAGGCTGCTGTACCTGCAACATCCTTTAG 1167 0.4113 MDYEPEFLYPISKKDMETVKYYFDNETEFMPARNFFTNDLNILYRMHAVSVIAKVTKKDDPDAYVPYLAMNYFDRFICRCDMRRVEGQTDTEKVCLIAISCFTLSAKMRTESFSVEHFLFDLDRDMNLNITQRSVMRMEGLIKKKLDWKMKSVTAFCFLNHYYAYFKPLGGFKRRSINEIIVQAQGLHTFVDFMPSEVALSAFAAAATIAYPKNKIAKDIKRMMSPKVKECITMMVILCDSMKIQIDTSRSSEDVEEEDRTALIDKRRQDMGKTETSQLQMKVKLEELFDKKDAAAEETDAEKRSLAKCKGKGKAVEKVKQPQPQVEGYISEIEPKKFMNFELKWETDVPSLEVGIGHPPPRESTGISLKIPGTGININLGCCTCNIL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01090 388 Gene3D - 32 151 - -
Trre15g01090 388 PANTHER CYCLINS 17 252 IPR039361 -
Trre15g01090 388 Pfam Cyclin, N-terminal domain 19 150 IPR006671 -
Trre15g01090 388 SUPERFAMILY Cyclin-like 15 150 IPR036915 -
Trre15g01090 388 Gene3D - 24 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01090 Trre-Chr15 8445859 8447853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01090 17 207 Core Cell Cycle Gene Families AT1G70210 29.146 1.52e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01090 - K18812 tpra:123896490 387.497