Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01054 ATGGAGGTTATGGGTGTTGATGTTTGGGTGTTAATGGTGTTGATGGAGGCTTCGCCTGGTTTTGATGGAGGTTTTTCTCTGGGGTTCTCTACGGCTAACGACGAGTACCACTGTTTGGGGGTTTATGTTTTCGCCTGGGTTTTGGGTGTTGGTCCGTTCGGTTTTAGTCCTTCCCTTCCTTTCGGTTCCGTCGTGCCTGCTGCTACCTTTCTATGCCGGTGGGTTGGAGTTTCTGTTTTGGATTTGGTGGAGTTTTTGTTGTTCTCGGTGAGTTTCTTCCGGCGGAGGTGGTGGTTTTGGCTCGATTCTGGAGGTTGGGTGAGGTCTATGGTGTTGGTGATGCCGATTCAAAAAAAAAGATATCTTACAAATAATCCACTTTGTTTGAAGAAAGCTAGGGAAGAGCAAGAAGAAATCATGAAAGCAAGAGCATCCTCACAAAAACGATTAAGTATTAAGGAAATTAAAAAAATGGTTTATCTTTCTCAGGTTATTGATGAAACATTAAGGCTTGTTGGTATCTTTTCTGTTTTTCGAGAGGCAACAACTGATTTAAACATCAATGGTTTTTTCATACCAAAAGGATGGAAAGTGATAGTTTGGTTAAGAGCTATTCATATGGATCACGAGTATCACTCAAATCCACAAGAATTCAATCCAGCGAGATGGAATGTAAGTTAA 681 0.4156 MEVMGVDVWVLMVLMEASPGFDGGFSLGFSTANDEYHCLGVYVFAWVLGVGPFGFSPSLPFGSVVPAATFLCRWVGVSVLDLVEFLLFSVSFFRRRWWFWLDSGGWVRSMVLVMPIQKKRYLTNNPLCLKKAREEQEEIMKARASSQKRLSIKEIKKMVYLSQVIDETLRLVGIFSVFREATTDLNINGFFIPKGWKVIVWLRAIHMDHEYHSNPQEFNPARWNVS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01054 226 Coils Coil 129 149 - -
Trre15g01054 226 Pfam Cytochrome P450 122 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01054 226 SUPERFAMILY Cytochrome P450 25 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01054 226 Gene3D Cytochrome P450 120 226 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01054 226 PANTHER CYTOCHROME P450 26 120 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01054 Trre-Chr15 8213023 8215838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01054 121 224 Cytochrome P450 AT1G05160 50.476 2.06e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01054 K04123 - ag:BAG68929 156.377