Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01051 ATGATGATACAAAATGGGCAAAAGAAAGACATTTTGGATATTCTTTTGGAGGATAAGGGTGAACATTCGGAGGATGGTGACATTATTGACTTATTGCTAGCACTTCTGTTTGCCGGTCACGAATCAACAGCATTACTTATGATGTGGTCAATTAGATATCTTACAAATAATCCACTTTGTTTGAAGAAAGCCAGGGAAGAGCAAGAAGAAATCATGAAAGCAAGAGCATCCTCACAAAAACGATTAAGTATTAAGGAAATTAAAAAAATGGTTTATCTTTCTCAGGTTATTGATGAAACATTAAGGCTTGCTGGTATCTTTTCTGTTTTTCGAGAGGCAACAACTGATTTAAACATCAATGGTTTTTTCATACCAAAAGGATGGAAAGTGATAGTTTGGTTAAGAGCTATTCATATGGATCACGAGTATCACTCAAATCCACAAGAATTCAATCCAGCGAGATGGAATGATTATAATTCTGCAACAGGAACCTTTATACCTTTCGGAATAGGCCCGTGGTTCTGTCCAGGAGGTGACCTAGCCAGATATGAAATAATCATATTTCTGCATTATTTCCTCCTTAATTACAAGTTGGAGCAAACAAATCCAGAATGTTCTGTGTTTTATTTGCCAGGTCCACATCCAATTGACAATTGTTCCGCTAAGGTCGTAAAGCTAACTACTCTTTAA 690 0.3638 MMIQNGQKKDILDILLEDKGEHSEDGDIIDLLLALLFAGHESTALLMMWSIRYLTNNPLCLKKAREEQEEIMKARASSQKRLSIKEIKKMVYLSQVIDETLRLAGIFSVFREATTDLNINGFFIPKGWKVIVWLRAIHMDHEYHSNPQEFNPARWNDYNSATGTFIPFGIGPWFCPGGDLARYEIIIFLHYFLLNYKLEQTNPECSVFYLPGPHPIDNCSAKVVKLTTL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01051 229 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS E-class P450 group I signature 27 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS E-class P450 group I signature 47 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS E-class P450 group I signature 133 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS E-class P450 group I signature 165 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 Gene3D Cytochrome P450 2 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 Pfam Cytochrome P450 5 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 Coils Coil 61 81 - -
Trre15g01051 229 SUPERFAMILY Cytochrome P450 4 205 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS P450 superfamily signature 38 55 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS P450 superfamily signature 166 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PRINTS P450 superfamily signature 95 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01051 229 PANTHER CYTOCHROME P450 26 8 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01051 Trre-Chr15 8165639 8172550 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01051 5 225 Cytochrome P450 AT2G32440 49.778 1.37e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01051 K04123 - ag:BAG68929 301.212