Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01043 ATGGATCAATTTAGACAGATTGGTGAAGCACTTGGAAGTTTAAAGGCTGTGATGGTGTTCAGAGAGAACATTCAAATCAATCAGAGACAATGTTGTCTTCTTCTAGATGTTTTCAGTTGTGCATATGAATCTATTGCAGATGAGGTCATACAGAATCTAAAATTTGAAGAGAAGAATGGGAAATGGAAGGTTCTAGAACAGCCCTTAAGAGAGATCCATAAGATTTTCAAAGAAGGAGAGGTTTACATTAAGCATTGTTTAGAAATAAAGAATTTTTGGGCTAAAGCCATTACCTTGTGTCATAACACAGATTGTGTTGAGTTTTACATACACAATTTGCTTTGTAGCATGCCTATTGTGATCGAAGCTATTGAATCGGCTGCTGAAACATCGGGTTTGGATCTTGACGAGATGCAACGGAAGAGGCTTATTAACTCCAATAAGTATATAAAAGAATATAGAGACATGAAGCTTTTCAAGTGGAAATTTGGGAAGCAGTATCTCGTTACTCAGGATTTGTGTAACCGTTACGAAACGAGTTGGAAGGAAGATAGATGGTTTCTTTTCAATAAAATCCATGAAAAGAAAGTGTCAGGTGCAACAAAGTATGAGAAGAAATTAGTAGATTTACTTTTGAGGAATTTAGAAGTGTCGGAATCGTTGGAAGCTAAGCTTCTGCCGAGTTCAATATTGGTTGGTTCTAAGGACTATCAGGTGAGGAGAAGAATGGGGAATGGAAGTCAATACAAAGAGATTCAATGGTTAGGCGAAAATTTTGTCGTAAGACATTTTTCTGGCGACATTGAAGCTTTGGAAGGTGAGATCAAAGAGATTTTATCGCTTTCACATCCAAATATAATGGATTGTCTTTGTGGTTTTACTGATGAGGAGAAGAAAGAATGTTTTTTGCTGATGGAATTGATGAGCAAAACTCTTAGCGCACATATTAAAGAGATTCATGGTCCGAGGAAGCGAATACCGTTCTTGCTTCATGTCGCGGTTGATCTAATGCTTCAGATTGCAAGAGGAATGGAATATCTCCATTCAAAGAAAGTGTATCATGGAGAATTAAACCCTTCAAACATTCTTGTTAAGCCTAGAAGTACCTCGCCAGAAGGTTACTTGCATTCCAAGGTAACGGGGTTTGGCTTATCTTCTGTTAAGGACTTGAACCAGAAAGGGAATACAAATCAAAATGGAACTCTCTCATTTATTTGGTACTCTCCAGAGGTACTTGAAGAGCAAGAACATTTGGGAGGCGCATTAATTTCCAAGTACACGGAGAAATCTGATGTGTATAGTTTTGGAATGGTTTGTTTTGAGCTTCTAACCGGTAAAGTCCCTTTTGAAGATAGTCATCTTCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAACGGCCACTTTTTCCACTTAATTCGCCGAAATATGTTATCAACTTGACGAAGAAATGTTGGCATACCGATCCAAACCAACGTCCGAATTTCTCGTCCATATGTAGAGTTCTTCGTTATATAAAAAGATTTCTTGGATTGAATCCTGGTAACAATAAAGAAACAGACCCACCACCAATTCCACCTGTAGATTACTGTGATATAGAGTCGGCACTTTTAAAGAAGTTTCCTTCTTGGGGAAGTTCTGAATCATCGACGATATCTAATATTCCTTTTCAAATGTTTGCATATCGAGTCATCGAGCGAGAAAAAATGAGCCCTTGGTCTAAAGATAACTCCGAATCCGGAAGTGACGCTTCAGCCTGTGGTGATGAACTTGTTACTTCTGGAGATGAGCCATTTCTATCAGTAATAGAAAAGAAATCTTCAGCTCCACCTGAGATTATAAACAGAAGGAGGCTTACACTGACTAGGAAATCACTAGATTCGAGGATGAAACCAGGTACGCCGAAAGGGAGATTAGAAAGACCTCCACAAATGTCCCCTCGGTTGCGAAGCTTGCGGATTAATTCAGATAAACATCTAATACCAAGTCCAAGGATAATAAGAAGATCTTCTTCTGGTCATGTCTCAGACTCTGAGCTAACTTAG 2049 0.3875 MDQFRQIGEALGSLKAVMVFRENIQINQRQCCLLLDVFSCAYESIADEVIQNLKFEEKNGKWKVLEQPLREIHKIFKEGEVYIKHCLEIKNFWAKAITLCHNTDCVEFYIHNLLCSMPIVIEAIESAAETSGLDLDEMQRKRLINSNKYIKEYRDMKLFKWKFGKQYLVTQDLCNRYETSWKEDRWFLFNKIHEKKVSGATKYEKKLVDLLLRNLEVSESLEAKLLPSSILVGSKDYQVRRRMGNGSQYKEIQWLGENFVVRHFSGDIEALEGEIKEILSLSHPNIMDCLCGFTDEEKKECFLLMELMSKTLSAHIKEIHGPRKRIPFLLHVAVDLMLQIARGMEYLHSKKVYHGELNPSNILVKPRSTSPEGYLHSKVTGFGLSSVKDLNQKGNTNQNGTLSFIWYSPEVLEEQEHLGGALISKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKKCWHTDPNQRPNFSSICRVLRYIKRFLGLNPGNNKETDPPPIPPVDYCDIESALLKKFPSWGSSESSTISNIPFQMFAYRVIEREKMSPWSKDNSESGSDASACGDELVTSGDEPFLSVIEKKSSAPPEIINRRRLTLTRKSLDSRMKPGTPKGRLERPPQMSPRLRSLRINSDKHLIPSPRIIRRSSSGHVSDSELT 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01043 682 Pfam Protein tyrosine and serine/threonine kinase 268 503 IPR001245 GO:0004672|GO:0006468
Trre15g01043 682 SUPERFAMILY Protein kinase-like (PK-like) 228 509 IPR011009 -
Trre15g01043 682 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Trre15g01043 682 PANTHER SERINE-THREONINE PROTEIN KINASE 277 509 - -
Trre15g01043 682 ProSiteProfiles Protein kinase domain profile. 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01043 682 FunFam Kinase family protein 234 517 - -
Trre15g01043 682 MobiDBLite consensus disorder prediction 623 682 - -
Trre15g01043 682 Gene3D Transferase(Phosphotransferase) domain 1 230 513 - -
Trre15g01043 682 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01043 Trre-Chr15 8101306 8103669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01043 274 504 MAP Kinase Kinase Kinase AT5G58950 28.205 4.43e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Trre15g01043 PK_Tyr_Ser-Thr 4.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01043 - - gmx:100813704 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01043 15 8101306 8103669 Trre15g01043 15 8101306 8103669 ECH