Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01027 ATGGGAGAAAATATTAATTGTGAAGAAATTGGACTCATTGGTGAACTAATGCAAGGAGAGGAGCTAGCAAAGAAGCTTTGTGATCAACTCTATCCATCATCATCATCATCACCATCATCATCAACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACAATCACATGTAGCTAATGAAGTATTACTTGACAAAATAGTTTTGTCCATTGAGAAAGCATTAACAATGTTGAAGGGTAATGTTGGAAAAATTAAGACAAACAATGTTAACTTGATGGATTCTCATTGTTCAAATGGAAGTCCTAAAAGTGAGGTCCAAGATTCAGTCTTCAAGCACAAACATGTCTCAAAGAAAAGAAAAACCATGCCTAAGTGGACAGAACAAATTAAGGTGTATTTAGAATCAGCACCTGAAGGGTCTGTGGAGGATGGTTATAGCTGGAGAAAGTATGGACAAAAGGATATTCATGGAGCCAAGTTTCCAAGAGGATATTATAGATGCACACATAGAAATTCACAAGGTTGTCTAGCTACTAAACAAGTGCAAAAATCAGAAGAAGATTCAATGGTATATGAGATAACCTACAAAGGAAGACACACATGCACCCAATCTAGTAATTTGAACAAGGCAAACCCATCAAAAAAATTGAAATTTGGACAAAATAAATCACAAGCCAATCAAAAAGTTCAACCTCAAGAAGAGAAAATTCAACCACCTCAAGAGAAAACTCTTACTTTTCAAAACAAAGAGGAAATATTCCCATCATTCAATTTTTCCTCTCCAACAATAGGATCTGAAAATGAAGATAACAACATGTTTTTAGAGTCCATGATTAAAAACAATTACATGGAAAATGAGAACAATGATATATTCTCAGAATCAAATAATTTCTGCTTATCACTATTGGATTTGGACAGCATTGAACTAAGCCCAAGTGATGAGCCTGATATTATGGAGATGATTTCAGGCCCAAATTCAGTTGTCAACTCTCCAATAGATTTTGATTTATTTAATGATATAAATTGTGACATGGATTTCTCTATAACACCGTTTATGTGA 1089 0.3407 MGENINCEEIGLIGELMQGEELAKKLCDQLYPSSSSSPSSSTSSSSSSSSSSSSSSSSSSSSSQSHVANEVLLDKIVLSIEKALTMLKGNVGKIKTNNVNLMDSHCSNGSPKSEVQDSVFKHKHVSKKRKTMPKWTEQIKVYLESAPEGSVEDGYSWRKYGQKDIHGAKFPRGYYRCTHRNSQGCLATKQVQKSEEDSMVYEITYKGRHTCTQSSNLNKANPSKKLKFGQNKSQANQKVQPQEEKIQPPQEKTLTFQNKEEIFPSFNFSSPTIGSENEDNNMFLESMIKNNYMENENNDIFSESNNFCLSLLDLDSIELSPSDEPDIMEMISGPNSVVNSPIDFDLFNDINCDMDFSITPFM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01027 362 ProSiteProfiles WRKY domain profile. 146 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g01027 362 MobiDBLite consensus disorder prediction 212 247 - -
Trre15g01027 362 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g01027 362 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 336 IPR044810 GO:0003700
Trre15g01027 362 Pfam WRKY DNA -binding domain 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g01027 362 SMART WRKY_cls 151 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g01027 362 Gene3D WRKY domain 137 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g01027 362 FunFam WRKY transcription factor 53 137 214 - -
Trre15g01027 362 MobiDBLite consensus disorder prediction 30 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01027 Trre-Chr15 8014358 8016593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01027 5 225 WRKY Transcription Factor Family AT4G23810 36.948 8.32e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre15g01027 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01027 - - psat:127076062 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01027 15 8014358 8016593 Trre15g01027 15 8014358 8016593 ECH
Trre13g05338 13 58350715 58352147 Trre15g01027 15 8014358 8016593 PCT