Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01022 ATGGAGGCCCTCAATTCTACTGTTTTCACCCCCCTTTCTGTGCTTTCTGACAGAACAAAATTTTCATCACACCCAACAATTTCTACATGCAAAGTTTCAAACTTTTCCACTTCAATCAACAGAAAACAGAACTTAAGAGAGTTTTTATCAAATAATTTTCAAAAGGGTCTATTCCTTGCTACAGCTTCAGTTGTGAATGTTAACAATGGTGAATTTGCAAATGCTCTAACATATGAAGAAGCATTAGGACAATCTCCAAGTGCTTCTTCTGGTGGTGACATTGATCTTAATGGTTTTGTAGATAGTGTCATAGGTTTTGCAACTGAGAACCCTTTAATTCTTGCTGGTGGTGTAGCTATTTTGGCAGTTCCATTGGTTTTGTCTCAGATTTTGAAGAAACCTAAGCCTTGGGGTGTTGAATCAGCTAAAAATGCTTATGCTAAATTGGGTGCTGATGGGAATGCTCAGTTGCTTGATATAAGAGGTTTGGCTGAGGTTAGGCAAGTTGGTGGACCAAATGTTGGTGGTTTGAAGAAGAAATCGGTGTCGATCGTTTATAAAGGTGATGATAAGCCAGGGTTTTTGAAGAAGATTTCCTTGAAGTTTAAGGAACCTGAGAATACTACATTGTTCATTCTTGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAATTAGTCACCCTTAACGGATTTAAATCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCACAAGGATGGCTGAATAGTGGCCTTCCTTGGATTGAACCAAAGAAAGCATTGAGCTTTGATTTTGGCAGTTTGACAGATACTGTCAATGAAGTAATCGGAGAATCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTACTGGAATTGGTGCATTAGCTTTTTCTGAGGTAGAAACAATTCTCCAACTTGTAGGATCAGCTGCAATTGTTCAGTTTGCAAGTAAGAAGCTTCTATTTGCTGAGGACCGGAAGAAAACACTAAAACAAGTTGAGGATTTCTTGAACACCAAGGTTGCTCCTAAGGAGCTTGTTGATGAAATAAAGGACATTGGAAAGGCTCTTCTACCAACTTCCACTAGCGATAAGGCTCTTTCCACACCAACGGAAAATATTCCAGAGCTCGCTACAGCTGGTGGCACCGTACCGAAAACTGAAGCTACTCCCGAAACTGTGTCCGAGATCAAAGCAGAAGCAGCAGTAGAACCTGTGATCAAAGCAGAAGCAGCTGCAGAACCTGAGCCCAAAGTAGAAGCAGCTGCAGAACCTGAGCCCAAAGTAGAAGCAGCAGCAGAACCTGCTACGGGAATACACGCCGTGCCAAAAACTGAAGCTGAGGCAAAGTCAATTCCTGTGCAATCTAGACCACTTTCTCCATACCCATATGTAATGTCTTAA 1413 0.4161 MEALNSTVFTPLSVLSDRTKFSSHPTISTCKVSNFSTSINRKQNLREFLSNNFQKGLFLATASVVNVNNGEFANALTYEEALGQSPSASSGGDIDLNGFVDSVIGFATENPLILAGGVAILAVPLVLSQILKKPKPWGVESAKNAYAKLGADGNAQLLDIRGLAEVRQVGGPNVGGLKKKSVSIVYKGDDKPGFLKKISLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKSAYAIKDGAEGPQGWLNSGLPWIEPKKALSFDFGSLTDTVNEVIGESDGLAVTLGIAAATGIGALAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVEDFLNTKVAPKELVDEIKDIGKALLPTSTSDKALSTPTENIPELATAGGTVPKTEATPETVSEIKAEAAVEPVIKAEAAAEPEPKVEAAAEPEPKVEAAAEPATGIHAVPKTEAEAKSIPVQSRPLSPYPYVMS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01022 470 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 467 IPR044240 -
Trre15g01022 470 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 137 257 IPR036873 -
Trre15g01022 470 Gene3D - 137 267 IPR036873 -
Trre15g01022 470 MobiDBLite consensus disorder prediction 414 470 - -
Trre15g01022 470 MobiDBLite consensus disorder prediction 414 430 - -
Trre15g01022 470 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 135 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01022 Trre-Chr15 7977097 7980771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01022 1 373 Sulfurtransferasese or Rhodanese AT4G01050 64.533 7.00e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01022 K17525 - gmx:100784482 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01022 15 7977097 7980771 Trre15g01022 15 7977097 7980771 ECH