Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01011 ATGAAATCTATTTTACCTGCAAATCAGAATGATGATGAGAATGAAGAATCAATTTGGTCTTCATATGATTCCTGGCTAGAAAAGCATCCTTCAGCATTGGAAAATTTTGAAAAAGTGATGAACATTGGAAAAGAGAAAAATATTGTTGTTTTCTTAGATTATGATGGAACGCTCTCTCAAATCGTAGATGATCCAGATAAAGCTTACATGACCGATGCCATGCGTGCGGCCGTCCGCGAAGTTGCTAGTTATTTTCCTACTGCCATTGTTAGTGGAAGGTCTAGGAATAAGGTTTATGATTTTGTGAAATTGAAAAATATCCATTATGCTGGGAGTCATGGAATGGATATATCAACACCTCAAGGGTCATCCAAGTATCAAGATAAGAAGCATCAACAAAAGGCTGTTGATGAAAAGGGTAATGAAGCTATTCTTTTTCATCCAGCAAAAGAATTTTTGCCAACAATCCAAGAGATTGGTAAGATTTTGAAAGAAAATATAACAATAATAAAGGGCTCTACTATTGAAGACAATAAGTTTTGTGTCACGGTACATTACCGTCGTGTGAAAAATGAAAAGGATGTTGAAGTTCTCAAAGAAATTGTTGAATCAATTATGAAAGATTACCCTAATTTTCACATTTCTGGAGGAAAAAAGGTTTTGGAGATACGCCCAAATGTAAAATGGAATAAAGGTCATGCTCTAATGTATTTGCTTGACACTCTTGGATTTGACAACTTTGATGATGTTTTACCAATGTACATTGGGGATGACAGGACTGATGAAGATGCTTTCAAGGTTATAAGACAAATTGGAGGAGGTTTTCCAATTATTGTTTCTTCAATTGCTAGGGAGACAAATGCTTCATATTCTCTGCGTGACCCTGCTGAAGTTATGACTTTCTTGATTTATTTAGCAAAATGGAAGAAGAACTTGATGAAGAAAACTAAAGAGAGAAAGTGA 963 0.351 MKSILPANQNDDENEESIWSSYDSWLEKHPSALENFEKVMNIGKEKNIVVFLDYDGTLSQIVDDPDKAYMTDAMRAAVREVASYFPTAIVSGRSRNKVYDFVKLKNIHYAGSHGMDISTPQGSSKYQDKKHQQKAVDEKGNEAILFHPAKEFLPTIQEIGKILKENITIIKGSTIEDNKFCVTVHYRRVKNEKDVEVLKEIVESIMKDYPNFHISGGKKVLEIRPNVKWNKGHALMYLLDTLGFDNFDDVLPMYIGDDRTDEDAFKVIRQIGGGFPIIVSSIARETNASYSLRDPAEVMTFLIYLAKWKKNLMKKTKERK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01011 320 NCBIfam HAD-IIB family hydrolase 50 270 IPR006379 -
Trre15g01011 320 FunFam Trehalose 6-phosphate phosphatase 155 315 - -
Trre15g01011 320 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 5 315 IPR044651 GO:0004805|GO:0005992
Trre15g01011 320 SUPERFAMILY HAD-like 49 311 IPR036412 -
Trre15g01011 320 Gene3D - 48 146 IPR023214 -
Trre15g01011 320 Gene3D - 161 320 IPR023214 -
Trre15g01011 320 NCBIfam trehalose-phosphatase 47 306 IPR003337 GO:0003824|GO:0005992
Trre15g01011 320 Pfam Trehalose-phosphatase 51 295 IPR003337 GO:0003824|GO:0005992
Trre15g01011 320 CDD HAD_TPP 49 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01011 Trre-Chr15 7903628 7905967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01011 50 306 Trehalose Biosynthesis Gene Families AT1G23870 24.723 3.12e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01011 K01087 - cam:101508225 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01011 15 7903628 7905967 Trre15g01011 15 7903628 7905967 ECH