Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00999 ATGCCTGCATGTTATGATGTGTCTGTGAGTGATCCCAATTCAATATGGCAAACTGATAATATTCTTTACAAGGAGCTTCCTACTCTTGCCGTTCAATTGGCCTTTACCACAATTGTGTCTCGTTTTTTTTTCTTTATATATAAACCTTTTCATCAATCTCAGCTCATTGCACAAATCTCTGTTGGCATTTTTCTAACTCAAGTCCTTTGGAAATTTAATTTTTTCGGATTCATTTTTCCTGCATCCGGGGTGATTAACATTGACATTCTAACACATGCTGGTGTCGTATACTACGCATTCTTAACTGGTTTGGAGATGAACTTGGATACAATTTTACATGTAAAAAAGAAAGCCGCAACCATTGCAATTTCGGGGTTCATCTTTCCGATGGTGATGGGACCAATTTTATACACTCTACATCGAAGGGTTTATAGCAATGATGTGAAATACCCACTTGAAGAAAGTAAAATGAATGCTTATGTACTATGGACTTTAGTTCTCACTGTGACAGGTTTTCCAGTTGTAGTTCACACACTTACTGAGCTCAAACTTCTTTATACCCGTCTTGGAAAGATTGCATTAACAACAAGTATGATCAGTGACACATATGCTTGGATTTTATTCACATTAGTTGTTCCATTTTCAATTAATGGTACAAGGGCAATATACTCAGTATTAAGCACCATAATATTTGTTTTCATTTGCATCTACGTGGTGCGTCCAATCGTCGTAAAGGTCATTGATCGCAAGACAGAAAGAGATGAATGGGATGATAATCAATTACTCTTTGTTGTGATGGGAATTTTTATTTTTGCATACATAACAGATGCTCTTGGCACACATGGCATTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCATAGTAAATTTGCTGACATGGTGATATCAATGACTGATGATTTTGGTGGTGCATTTTTAGTACCACTTTACTTTAGTGGCAGTGGAATGCGAATCTCATTTAGTATTATTTTTAACCAACCAAATTGGCCTTTATCGCTTATGGTTATAATCTTGTTGTGTGTTCCAAAGATTTTAAGCACTTTGTTTGCCACTTTCTTTTTTGGCATTCATGCTCGTGACGGTTTTGCTCTAGGCATAATTCTTAATACCAAGGGTGCTGTTGCACTAATGATGCTTAATACGGCTTGGGATAAAGAGATTCTTTCTGTACCAACCTATTCTGTCTTAACACTCGGAGTCCTTTTAATGACTATAGTGGTGCCTCCCATCATCAATATCATATACAAGCCCAGAAAGCATTTTGAGCAAAACAAGCTAAAGACTATACAAAAACTAAGACTTGATGCAGAGCTCAGGATTCTGGCATGTGTTCACAATGCTCGCCAGGCTGCGGGGATTATTAGCCTCATTGAATCTTTCAATGCCACCAGACTTTCACCAATACATGTTTTTTCACTTTACCTTGTTGAACTCACAGGACGTGCTGGTGCACTTGTTGCTTCTTATTTGGAGAAGCCTAGTGGCCATCTTGGAGCACAAAATCTTACAAGATCTCAGGAAGAGCTTGAAAGCATTAACAATACCTTTGAAGCATTTGGAGAGGCATATGATGCCGTTAGAGTCCAAACCTTAAATGTTGTGTCAGCCTATGCAACCATTCATGAAGACATATCCAACTCAGCTAATGAAAAGCGCACTAGCTTAATTATCCTTCCATTCCACAAACAACTCAGTTCAGAAGGTGCACTAAAAACAACCAGTGTTGCATACAGAGATATAAACCTGGATGTGATGCAAGGTGCACCTTGCTCTGTGGGAATCTTTGTTGATCGTGATATTGGTCCACTACCAAAAATGAACTTTTGTATTTGTATGATCTTTATTGGAGGTCCCGACGATCGTGAAGCCTTAGCCATTGCATGGAGGATGGCGGGGCACCCAGGAACCCGATTATCAGTGGTTCGAATACTCTTGTTTGATAAAGCTGCAGAAGTAGACACCTCAAATCAGGCTGAAGCACAAGGAATACTATCTCTTGTAATGGATAATGAGAAGCAGAAGGATTTAGATGACGAGTATGTGAATTCCTTTAGACTAATAGGAGTGCACAACAATGATTCTATATCATATTCAGAGGTTGATGTTCATTCAGATGAAGATATTTCCACAATACTCAATGAACTAGAAAATTTTGGCTACAATTTATACATAGTTGGACAAGGGAATCGTAGGAACTCTCGGTTTTTTTCAAATTTATTAGAATGGTGTGATTGTTCAGAACTTGGAGTAATAGGGGATATGTTGGCATCAGAAAATTTTGGTTTGCGCTCGTCTGTGCTAGTTGTGCAACAATATGGATATGGAGGAATGGTTTCCGGAAAGCAATCTGCTAATAACAATGGTTTAGAGGCTGTTGTCGTGAAGACGGAATAA 2418 0.385 MPACYDVSVSDPNSIWQTDNILYKELPTLAVQLAFTTIVSRFFFFIYKPFHQSQLIAQISVGIFLTQVLWKFNFFGFIFPASGVINIDILTHAGVVYYAFLTGLEMNLDTILHVKKKAATIAISGFIFPMVMGPILYTLHRRVYSNDVKYPLEESKMNAYVLWTLVLTVTGFPVVVHTLTELKLLYTRLGKIALTTSMISDTYAWILFTLVVPFSINGTRAIYSVLSTIIFVFICIYVVRPIVVKVIDRKTERDEWDDNQLLFVVMGIFIFAYITDALGTHGIVGAFVYGLILPHSKFADMVISMTDDFGGAFLVPLYFSGSGMRISFSIIFNQPNWPLSLMVIILLCVPKILSTLFATFFFGIHARDGFALGIILNTKGAVALMMLNTAWDKEILSVPTYSVLTLGVLLMTIVVPPIINIIYKPRKHFEQNKLKTIQKLRLDAELRILACVHNARQAAGIISLIESFNATRLSPIHVFSLYLVELTGRAGALVASYLEKPSGHLGAQNLTRSQEELESINNTFEAFGEAYDAVRVQTLNVVSAYATIHEDISNSANEKRTSLIILPFHKQLSSEGALKTTSVAYRDINLDVMQGAPCSVGIFVDRDIGPLPKMNFCICMIFIGGPDDREALAIAWRMAGHPGTRLSVVRILLFDKAAEVDTSNQAEAQGILSLVMDNEKQKDLDDEYVNSFRLIGVHNNDSISYSEVDVHSDEDISTILNELENFGYNLYIVGQGNRRNSRFFSNLLEWCDCSELGVIGDMLASENFGLRSSVLVVQQYGYGGMVSGKQSANNNGLEAVVVKTE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00999 805 Pfam Sodium/hydrogen exchanger family 34 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre15g00999 805 Gene3D - 28 432 IPR038770 -
Trre15g00999 805 PANTHER CATION/H + ANTIPORTER 15 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00999 Trre-Chr15 7818596 7821283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00999 4 780 Antiporter Super Family AT2G13620 37.262 3.06e-176 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00999 - - gmx:100804266 1157.13