Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00938 ATGACAACCGACATTGATAATCTCTGGATTTTGGCTCTTGCTTCCAAATTCACACATGAAAACATTGTTTACTCACTTTTGATCATGGCTTTACTCTGTCTAACCATGACTTTCTTTTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGAAAGTACTATTATTCCAACAACAACAAAAACCAAAACAAAAATAAAAACAACCTTAATTCCTCTCAAATATTCATTCCTGGTCCAAAAGGGTACCCTTTAATTGGAAGCATGAATCTCATGTCTTCTTCACTAGCACACCAAAGAATTTCTTCCACAGCTAAAACATGCAAAGCTACAAGACTTATGGCTTTTAGTCTTGGTGACACACGTGCCATAGTCACGTGTAATCCTGATGTAGCCAAAGAGATTCTTCATAGCTCTGTTTTCGCTGATCGTCCTATCAAAGAATCTGCTTACTCTCTTATGTTCAATAGAGCAATTGGTTTTGCTCCTTATGGTGTTTATTGGAGAACCCTTCGAAAAATTTCAACTAACCATCTTTTCTCACCCATGCAAATCAAATCATCTGGGCTGCAACGAACTGAAATTGCAGCCCAGATGATTCACTTGTTTCGTAACCGCAGCTATAACAGTTGCGGTTTCGGTGTTCGTGATGTTTTGAAAAAAGCATCACTAAATAACATGATGTGCTCTGTTTTTGGACAGAGGTTTAAAATTGATGAAGTTAATGAGAGAATGATGGAACTTAGTGGATTAGTTGAAAAAGGTTATGATTTATTGGGTAGTCTTAATTGGGGTGATCATCTTCCTTTTTTGAAAGATTTTGATGTTCAGAAAATCCGGTTCAATTGTTCTGAATTAGTGCCTAAAGTGAACCGGTTTGTTGGTTCAATTATTTCCGACCATCGAGCCGACAAAAACCAAACCAACAAGGATTTCGTTCATGTCTTACTCTCTCTTCAAGAACCAGATAAATTGTCTGACTCTGACATGGTTGCTGTTCTCTGGGAAATGATATTTAGAGGGACCGACACAGTGGCTGTTTTGATAGAATGGATACTAGCGAGGTTGGTGCTACATCCAGACATGCAAAGGAAGGTACAAAAGGAGCTTGATGAGGTGGCAAGCGGAGACGCACGTGTGTTTACGGAGGAGGATGTGGCGGCGACGGTTTATTTACCTGCGGTGATTAAGGAGGTTTTAAGGCTACATCCACCGGGTCCACTACTTTCGTGGGCCCGATTAGCCATCACTGATACGACAATTGATGGGTATCACGTGCCAGCGGGGACTACAGCCATGGTAAACATGTGGGCCATAGCTCGGGACCCAAATGTGTGGAGGGACCCACTTGAATTTAATCCCGATAGATTTGTAAACGAAGGGGCGGAATTTTCGGTTCTTGGATCGGATTTAAGGTTGGCTCCATTCGGGTCAGGTAGGAGAAGTTGCCCGGGAAAAAATTTAGGTTTAACCACAGTAACTTTTTGGGTTGCTAAGCTTTTGCAAGAGTTTGAATGGCTACCGTCGAACAGTGATAATGATGTTGATTTAACGGAGGTGCTAAGGCTTTCGTGTGAAATGGCTAACCCTCTTATGGTTCAAGTGCGCCCGAGGCGTTAG 1614 0.4207 MTTDIDNLWILALASKFTHENIVYSLLIMALLCLTMTFFYWSHPGGPAWGKYYYSNNNKNQNKNKNNLNSSQIFIPGPKGYPLIGSMNLMSSSLAHQRISSTAKTCKATRLMAFSLGDTRAIVTCNPDVAKEILHSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRKISTNHLFSPMQIKSSGLQRTEIAAQMIHLFRNRSYNSCGFGVRDVLKKASLNNMMCSVFGQRFKIDEVNERMMELSGLVEKGYDLLGSLNWGDHLPFLKDFDVQKIRFNCSELVPKVNRFVGSIISDHRADKNQTNKDFVHVLLSLQEPDKLSDSDMVAVLWEMIFRGTDTVAVLIEWILARLVLHPDMQRKVQKELDEVASGDARVFTEEDVAATVYLPAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIARDPNVWRDPLEFNPDRFVNEGAEFSVLGSDLRLAPFGSGRRSCPGKNLGLTTVTFWVAKLLQEFEWLPSNSDNDVDLTEVLRLSCEMANPLMVQVRPRR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00938 537 FunFam Cytochrome P450 78A5 67 536 - -
Trre15g00938 537 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 Pfam Cytochrome P450 76 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 CDD CYP78 107 529 - -
Trre15g00938 537 PANTHER CYTOCHROME P450 78A7-RELATED 1 537 - -
Trre15g00938 537 SUPERFAMILY Cytochrome P450 75 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Trre15g00938 537 Gene3D Cytochrome P450 59 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00938 537 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00938 Trre-Chr15 7306876 7308733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00938 1 537 Cytochrome P450 AT2G46660 63.653 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00938 K20619 - gmx:100798388 805.823