Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00894 ATGGAAAGTTTCCTATGTGATTTGGTGAAGCCATATGTGGAGAAATTGATTGATGGTGCAATAGCAGAAGCACGTCATGTACTTTGCTTCACATGTACTGTTAAGCAATTTCAAGAAGAAAGAGCTACGTTGGAATCAGAAAGGGAAACAATGGAGCAACGTGTCAAAGTGGCAAAAGAAAGAGATAAAGATATTCAAGCTAATGTTGTTTCTTGGCTAGGGGAAATTGATGAGCTCAATCAAGTGGACACAAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTGATTGTATATGGCGATATAAAAAGGGAAAGGAGTTAGCAAATAACTTGGGAAAGATCAATCAACTACAGGGCAAGAAATTCGAAAATATTGAACTTTCTCGCCCTCTTCCAGGTGTTGAGCAGCTTTCATCCAAAGATTACATTACTTTTAAAACCAGAGAGTCAAAATACAACAAACTGTTGGAAGCACTGAAAGATGACAACAACTATATAACCGGATTGCAAGGGATGGGGGGAACCGGAAAGACTACATTGGCCATAAAAGTGGGCAAAGAGCTAGAGCAATCTAAACAATTTGCTTATGTCATTGTTACGACCGTTTCATTTACTCCTGATATAAAAAAAATTCAAGATGATATTGCTGGATCTTTAGGATTGAAATGGGAGGGTTGTAATGAATCAGACCGACACAAGAAACTATGGAGCAGATTAACAAATGGTGACAAAATTCTTTTGATACTGGATGATGTGTGGGATCTAGAGCCGCAACTTCATTTTGATGCAATAGGGATTCCAAAAGAGGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCACGCAGTATGAAAACTTTTGACATGTTGGATTGTTATAAGAGAATTGAATTGGATCTTTTATCCGAAGAAGAGGCATGGGACATGTTCAAAATTTATGCCAAGATAGGTGATGATAGCACCCCCAAAAATTTGATCGATAAGGGACATGAAATTGCAAATGAATGCAAAGGATTACCAATTGCAATTTCAGCTATTGCCAGAAGTTTAAAAGGCCAGCAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAGAAGCCGGTATCCATGCATGGTGTTGAGAAGAATATGGCTAGAATTTATAACTGTTTGAAGACTAGCTATGATAATTTGATGGATGAAAATTTCAAAGGGTTGTTCCTCTTATGTTCAGTTTTCCGAGAAGATGAAGAAATATCTATTGAAGTTCTAACCAGACTTTGCATAGGAGTGGGTCTTTTCGGGGAAGATTATGGCTATTATAATGATGCTCGAGAAAAAGTAGTTGTGGCCAAAAACAATCTTGTAGATTCTTGTTTGTTGTTGAATGTTGATGCAGAACATGTAAAAATGCATGATTTGGCTCGTGATGCAGCTCAATGGATAGCAAAGAAAGAGATTCAATGTGTAAAATTGTTTGATAAAAAGCAAAAGTCATTGGTAGAAAATCAGACAAATATCAAACATTTATTATGTGAAGGGAAGAGCATGGATATTTTTAACTTGAAACTTGATGGTTCCAAACTTGAGACTTTAATTGTCATGGTGGATAGAGATGATGACAACAAATATATAGTTCTAAATACTTTCTTTGAAAATGTTATCAAGCTTCGTGTTTTGTATATTTTAGGTAATTATTATTACCAACCGTCTTTATCATTACCAGATTCAATTCGGTTATTGATTAATATTCGATCTATGTCGGTTGATCATGCGGATTTAGGTGACATCTCTAGTTTGGGAAAACTACAAAGCCTTGAGACTCTTGATTTGGTTAGATGCAAAATCAATGAATTGCCAAACCAAATTGCAGAACTGAAGAAGTTTAAATTGTTGAAGTTGAAAAGTTGTGAAATTAGAATGAATAATCCATTTGAAGTTATTAAAAGATGCTCATCACTTGAAGAGTTGTATTTCGAAAATAGTTTCAATGGTAGTTGTAAGGAAATAACCTTACCTGAGTTGCAAATATATCATATCAGGAATGATCGGGGATGCTTACATTTAGAGAGAAATGACTTTCCAAAATATGTTGTGTTTGATGAAAAGTGTCAATTTTCAAATGAAACACTCAAGTACTGCATGCAAACAGCAAAGGCTCTTTGTCTAGAAGGAATTAAGGGGGAGTGGAGAAATATCATGCCTGAGATTGTTGAACTTGGTCGGAATGATCTTGTTGAACTTCATTTGAGGGACATGTCACAACTACATTGCCTCATTGACACCACTGGTTTTCAAGCACCAAATGTCTTGTCCAATTTGGTTGTACTAGAACTGCAAGAAATGGAAAATTTGGGAAACTTGTTTAAAGGTAAGCTCAACCTCTACAATCTAAAATCTATCACAATTAAGAGTTGCCCTTTGTTAGTTTTCCTATTTGAGGTGTCAACTTCTCAAAACTTAGTGCTACTAGAGACATTGAAAATATCTAACTGTGAGGGACTGAAAACCATAATAGCAGATGAAAGAAGAGAGGGTAATAATAAGAATCTAGCTTCAGTGTTTTCGAAACTAAAAGTTATCGATATTGAGAGATGTCACAGATTAGAATCTATACTACCTTTCCTCTCTGCTCAAGACCTTCGGGTACTAGAAGTTATCAAAATAAGAGAATGTAATGGATTGAAATATGTCTTTGGCCAATCTCAACATGTTGAACTGATTTCACTAAGTGAATTGGAGCTCTCTGAATTACCAAAGTTCATTGGTATTTTTGAAGAATGTTATGATCCCGTCACAACTTCATGTGTGAAGAAGGGATCATCTTCCATTTCCAATTATGGTTCGAAAGCACAAACACAATTGGATCCTCCTATAAAATGCAATACCTTCTCTTGGTGGACTCATTTATGTTGTCAAACCACAGTCCCATTGGTTGATGTTGGTGTTGATCAACCACATGACTATTGCTCAGTGTCATCAGAATCAAATTCATATTGTCTCGACATATGGGAATGTGTTCAATGTCTTCCAATACAATCAAAGATTCTCTGCAATATTAAACAGATTGTACTGACTCATTTTCCAAAGATGAAATCAGTATTTATCTTATCTATTGCTCCAATAATGCAGTTGGAAAATTTGAAAATTATGAACTGTGATGAACTGAAGCATGTAATAATTGACACTGGAGATCATAACACTGGTGGCAACAACTCCATCAATGTCTTCCCAAAATTGAAAGAGCTCTATGTTGAAGATTGCGAGCAATTGGAATACATATTTGGACATGACACTAGTGATCATCAAAACCACATGGAGATTCAGCTTCATCTTCCGGAATTGAAAGATCTTCATCTTGTCAATCTACCAAGTTTGATCGCCATGTGTCCCAAACAATATCGAACAACATATCCTTATTTGGAAAAACTTGTTCTCTATAATTGTTCCCAGGTTGATACGATCATTAAGGAACTGAGTGGGAACGTTGATCATTTTCTCACTTTGGAAATCCTTGAGGTATGCAATAATTCCAAAGTAGAAAATATGTTTTCTCACTTTGGAGGACATCAACTGGACTTGGGTTTGCAAGAGATTGAGTTGTATGATCTGCCTATGATGACTTGTCTTTTTGTTGGTCCCGAAAATTCACTTGCCCTCAAAAACCTTACGCGCATAAAAATTGTGCGATGTAATAAATTAAAAATTGCATTCTCCACTTCCATTTTAAGATTCCTACCACAATTGATTTATTTAATGATAAAAGAATGCAAAGAGTTGAAGCATATTATTGAAGAAGATGATGATTTGGAGAATAAAAATAATTCAAGAACATGCTTCCCAAAGCTAGAAGCACTTGTTGTTATAAAGTGCAACAAGTTGAAATCTGTTTTTCCATTCTCTGTATGTAAAGAGCTTCCCAAGCTTAAAGTTCTGGTGATAACAGAAGCAACTGAGTTAGAAGAAATATTCAAAAGTGAAGATGATCAGAAAGTTGATATTCCAAAACTAAATATTTTAGCATTTGATATGCTACCAAGCCTCTGCAGTGCTCAGGGAAATCAATTTCAGGCTGTAAAAAATCGCTTTGTGCGGAATTGCTGTCAAAAGCCCACTCTGACTTCGGCATCAACAACCAAAACCTCGAGACAAATTGCTAAATTATTTATAAGTTATGAATTGTTTGAGATTTTAAGTAATCTATTTGAACAATTACCAAGTTCAAAAACCACAGAAGAACACAAGTCCAATTTAGCAAGTTTTGAAAATGCTGGGATTGAACAACTACCAAGTGTAGAAACAACTGAAGATTTTGAACTACCAAGGGTTGAAAAATCAGAAGAATTGAATTATAATATAAACATAAACATCCTTTTAAATTTTAAGCAGGGTATTGAGGTAGAAGGAACTAATAAGACTAACAATGATCAAGTTTCTCTAAATGATGATGCTAACTCAAATCTTGAGGAACAATTTTCTAAAGATGATGAAAAACTAATTTCCAAATCTAAACCGTCCTCTCCTAGCAACGCAGCTCATATTGCATCTCGGTTCCCTTCAGTGCCTTCTAAAGGGGATCCTTCTCAAGAAATAGAAGATTTAGCAATACTACCAACAAATTCAGAAGAGTTGCTGAATGAACAATCAGTTGGAGAAACTGATGCTATAGTCAAACCTTCTCAAGGTATTGAGATAGAAGGAAATTCTAAGACTAATAATGATCAAGTAAACACAAATGTTGAGGAACTGTTTTCTAAGGATGATGAAATAATACTTTCCAAAACTAAACCCTCTCCTAGCATCACATCTCCTATTGCATCTCAGTTCCCTTCAACACCTTCTAAAGGTGACCCTTCTCAAAAAGTAGAGGATTTAACTTCTTTGCTTGTCAAGAGGGAGCTTGAGGAACTGATCTCCAAGAATCATTTGAATTATGAGAACTTGTCTTTGTTAACTGATTTTCTTGTTAAGAATCCTTCTGTTCGTTTAAGGGACACTTCACTTCGTTATAGATACAAGGGTTGTGCTTACAACTTACTAGCTGAACTATTGAAATTCCTTGAAACTCGTAGTTTGATGGAAGTATCGGGCTCATGCCACTCTGAATTTGTGGAGCTATTACAAGATGCGCGCAACTTTGGTTTTAATAAGGAATGGTTGGATGGTGTCGAGAGGCGTGCTTTATTTCCTGAAATACAAGCATCTCCAGATGCTTTGGAAAATTTATTGGATTCCCAAAAACGAATTACCAAGGTTGTTGAAGATTTGCGTTTGAAGATAGACATTTTAAGTCAACATGTGGAAGATCTTAAGCATCAAATGACATCCTCTGAAGTTGAATTGGAGAGTATCATTCAAAAAAAGGCAGTTTTAAGTGCCCCTATTGGTTATTAG 5385 0.3556 MESFLCDLVKPYVEKLIDGAIAEARHVLCFTCTVKQFQEERATLESERETMEQRVKVAKERDKDIQANVVSWLGEIDELNQVDTKTKQTCFFGFCPDCIWRYKKGKELANNLGKINQLQGKKFENIELSRPLPGVEQLSSKDYITFKTRESKYNKLLEALKDDNNYITGLQGMGGTGKTTLAIKVGKELEQSKQFAYVIVTTVSFTPDIKKIQDDIAGSLGLKWEGCNESDRHKKLWSRLTNGDKILLILDDVWDLEPQLHFDAIGIPKEDNHKGCRVLVTSRSMKTFDMLDCYKRIELDLLSEEEAWDMFKIYAKIGDDSTPKNLIDKGHEIANECKGLPIAISAIARSLKGQQNREHEWDVTLKSLKKPVSMHGVEKNMARIYNCLKTSYDNLMDENFKGLFLLCSVFREDEEISIEVLTRLCIGVGLFGEDYGYYNDAREKVVVAKNNLVDSCLLLNVDAEHVKMHDLARDAAQWIAKKEIQCVKLFDKKQKSLVENQTNIKHLLCEGKSMDIFNLKLDGSKLETLIVMVDRDDDNKYIVLNTFFENVIKLRVLYILGNYYYQPSLSLPDSIRLLINIRSMSVDHADLGDISSLGKLQSLETLDLVRCKINELPNQIAELKKFKLLKLKSCEIRMNNPFEVIKRCSSLEELYFENSFNGSCKEITLPELQIYHIRNDRGCLHLERNDFPKYVVFDEKCQFSNETLKYCMQTAKALCLEGIKGEWRNIMPEIVELGRNDLVELHLRDMSQLHCLIDTTGFQAPNVLSNLVVLELQEMENLGNLFKGKLNLYNLKSITIKSCPLLVFLFEVSTSQNLVLLETLKISNCEGLKTIIADERREGNNKNLASVFSKLKVIDIERCHRLESILPFLSAQDLRVLEVIKIRECNGLKYVFGQSQHVELISLSELELSELPKFIGIFEECYDPVTTSCVKKGSSSISNYGSKAQTQLDPPIKCNTFSWWTHLCCQTTVPLVDVGVDQPHDYCSVSSESNSYCLDIWECVQCLPIQSKILCNIKQIVLTHFPKMKSVFILSIAPIMQLENLKIMNCDELKHVIIDTGDHNTGGNNSINVFPKLKELYVEDCEQLEYIFGHDTSDHQNHMEIQLHLPELKDLHLVNLPSLIAMCPKQYRTTYPYLEKLVLYNCSQVDTIIKELSGNVDHFLTLEILEVCNNSKVENMFSHFGGHQLDLGLQEIELYDLPMMTCLFVGPENSLALKNLTRIKIVRCNKLKIAFSTSILRFLPQLIYLMIKECKELKHIIEEDDDLENKNNSRTCFPKLEALVVIKCNKLKSVFPFSVCKELPKLKVLVITEATELEEIFKSEDDQKVDIPKLNILAFDMLPSLCSAQGNQFQAVKNRFVRNCCQKPTLTSASTTKTSRQIAKLFISYELFEILSNLFEQLPSSKTTEEHKSNLASFENAGIEQLPSVETTEDFELPRVEKSEELNYNININILLNFKQGIEVEGTNKTNNDQVSLNDDANSNLEEQFSKDDEKLISKSKPSSPSNAAHIASRFPSVPSKGDPSQEIEDLAILPTNSEELLNEQSVGETDAIVKPSQGIEIEGNSKTNNDQVNTNVEELFSKDDEIILSKTKPSPSITSPIASQFPSTPSKGDPSQKVEDLTSLLVKRELEELISKNHLNYENLSLLTDFLVKNPSVRLRDTSLRYRYKGCAYNLLAELLKFLETRSLMEVSGSCHSEFVELLQDARNFGFNKEWLDGVERRALFPEIQASPDALENLLDSQKRITKVVEDLRLKIDILSQHVEDLKHQMTSSEVELESIIQKKAVLSAPIGY 1794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00894 1794 MobiDBLite consensus disorder prediction 1591 1618 - -
Trre15g00894 1794 MobiDBLite consensus disorder prediction 1488 1526 - -
Trre15g00894 1794 FunFam Probable disease resistance protein At1g61300 132 292 - -
Trre15g00894 1794 SUPERFAMILY L domain-like 467 1171 - -
Trre15g00894 1794 Gene3D Ribonuclease Inhibitor 461 676 IPR032675 -
Trre15g00894 1794 SUPERFAMILY RNI-like 850 1184 - -
Trre15g00894 1794 Coils Coil 1750 1784 - -
Trre15g00894 1794 Pfam NB-ARC domain 151 394 IPR002182 GO:0043531
Trre15g00894 1794 PRINTS Disease resistance protein signature 240 254 - -
Trre15g00894 1794 PRINTS Disease resistance protein signature 598 614 - -
Trre15g00894 1794 PRINTS Disease resistance protein signature 167 182 - -
Trre15g00894 1794 PRINTS Disease resistance protein signature 337 351 - -
Trre15g00894 1794 SUPERFAMILY RNI-like 1209 1314 - -
Trre15g00894 1794 Coils Coil 34 61 - -
Trre15g00894 1794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 407 IPR027417 -
Trre15g00894 1794 MobiDBLite consensus disorder prediction 1592 1618 - -
Trre15g00894 1794 Gene3D - 301 396 IPR042197 -
Trre15g00894 1794 Gene3D - 137 297 IPR027417 -
Trre15g00894 1794 Gene3D Ribonuclease Inhibitor 726 933 IPR032675 -
Trre15g00894 1794 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1153 1329 - -
Trre15g00894 1794 Gene3D Ribonuclease Inhibitor 1136 1331 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00894 Trre-Chr15 6730723 6737882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00894 153 841 WRKY Transcription Factor Family AT5G45050 23.835 3.74e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00894 - - tpra:123886409 2261.88