Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00889 ATGTTTAATGTTGTTGTCCTCATGACATCTTTTGTTACAATAATTTTTCAACTTCTTTTGGTTTTTCCTTTAACATCATCCTTCAAACAAATCCAAACAAAACTAGTTGAACCATCTTTTCTTCAAAAAAATTCATGCAATGAAACATGTGGAAAACTTCATATTCCTTTTCCATTCTACATCAACAACACTTCATGTTCATCATTATCAAGTTCTTTTCACCTAACATGTTCAAATTCATCCACCCTTTTGATCAAAATAGGTTCACAAAACTATCCCATTTTGGAATTCTTTTCAGATGGTTTATTAGTAGATTTTCCCGGAACATCATCGTGTCGCCAATACAATGATTTAAATTCGTTCGGCGAAAGGTTTTTTGATGGAAAAAACTACTTTGGTATCTCAGTTGATAATGTTGTTGGTTTATATGATTGTGAAGATTCTTCACTTTGTAAAGCAGATTGTGAAACAGTTAATCTTCCTGGTTGTGATGGAAGTGTTGGTGGTGGTTCTCTTGGATGTTGTTATCCACTTTCTGATCATACTATATGGCATATTGGTGAAGGTTTTTCTGTCTTTTCAAAATTTGGATGTAGGGGATTTTCTAGTTGGACTGTTTTAAGAGGTTCTTATTCAGGTAAAAGAGGGGTAAAATTGGAATTTGGTATTCCTAGGAACTTATCTAAGGAGATTTGTGCTAAGAATGCTGATATGGTGAATGCTACATCAATTAAAAGTGGTGTAAGATGTGTTTGTGAAGATGGATATGTTGGTGATGGTTTTGCTAATGGAACTGGATGCTTATTGTCATGTATCAAAGATGGAAAGGAAGCATATGGAAGTGACTGCTACATAAAAAGACATGACCAAAGAAAAATGGTCATCATCGCGGGAATCCTTTGTCCAATTCTTATTGTTGCATCATTAGTTGCACTATTCTATCTTCTAAAAAGAAAACAAAAGCCAGGAATGTTCGATTCCGAGCAAGCTTATTACCACAACATTTCATTCCGAAAAGCGTGTAGAACTCGACTTTTCAGTCACCATGAGCTAGAAGAAGCCACCAATGGTTTTGAAGATAGTAGAAAACTCATGCAATGCAATACCAGCACAATTTTTGCTGGTGTAATTGGTGATGGATCACATGTAGCTATACACAAGATATCAAAATGTGAGAATGATAAAGATATGATGCAAGTTATGTCACAAATTGAAGTCTTATCTTCTATTGTACATAGAAATGTTGCATCAATCATTGGTTGTTGCATTGATTCTAACTACACTCCTTTAGTTGTTTATGAATATCCTGCAAATGGTACTTTGGAGGATCATTTACACAAAAACAAAGGACAAAAATGGCAAAAAAATGGTTTTTTAGATTGGTATAGAAGATTGAATATTGCAACAGAAATAGCTAGTACTATTGCATTGTTACATTATGATAAATCTCCTCCAATATTTCATCATAACCTAAGGTCTAGTTGCATATTCCTAGATGATGATTTTTCAGTCAAGATTGCAGGATTTGGAATACTTAATTATGATAACAAGAATTGCGAAAATCGTGAACGCTTTCGCTTGTGCAAAAATGATGTCTATGACATAGGTGTGTTACTACTTGAGATAATCTATGGATCAAATGAAATGGACTCACCTACATTAGCCTTGAAGAAAATAAGAGACGGAAAGATCGAAGAAATTGTTGATCCGCTTCTTAATTATCACGAACAACCGAGGACTTGTCAAGAACAGATACTTATCTTTGCTGATCTTGCAACAAGATGTTTACTATTTAGTGGAGATGGAAAAATGGGAATGATTGATGTTGCTAGAGAATTGGTTTATTTGAGTAAAGATAGTATTGATGGTGGAAATGTGAAAGGACTTGTTCTTGAAGAAACATTCTCAAATTCAAGTCTTCTTCAAATGATATCTTTGTCTCCTGATTCTATGAATGTTCATTGA 1965 0.3394 MFNVVVLMTSFVTIIFQLLLVFPLTSSFKQIQTKLVEPSFLQKNSCNETCGKLHIPFPFYINNTSCSSLSSSFHLTCSNSSTLLIKIGSQNYPILEFFSDGLLVDFPGTSSCRQYNDLNSFGERFFDGKNYFGISVDNVVGLYDCEDSSLCKADCETVNLPGCDGSVGGGSLGCCYPLSDHTIWHIGEGFSVFSKFGCRGFSSWTVLRGSYSGKRGVKLEFGIPRNLSKEICAKNADMVNATSIKSGVRCVCEDGYVGDGFANGTGCLLSCIKDGKEAYGSDCYIKRHDQRKMVIIAGILCPILIVASLVALFYLLKRKQKPGMFDSEQAYYHNISFRKACRTRLFSHHELEEATNGFEDSRKLMQCNTSTIFAGVIGDGSHVAIHKISKCENDKDMMQVMSQIEVLSSIVHRNVASIIGCCIDSNYTPLVVYEYPANGTLEDHLHKNKGQKWQKNGFLDWYRRLNIATEIASTIALLHYDKSPPIFHHNLRSSCIFLDDDFSVKIAGFGILNYDNKNCENRERFRLCKNDVYDIGVLLLEIIYGSNEMDSPTLALKKIRDGKIEEIVDPLLNYHEQPRTCQEQILIFADLATRCLLFSGDGKMGMIDVARELVYLSKDSIDGGNVKGLVLEETFSNSSLLQMISLSPDSMNVH 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00889 654 ProSiteProfiles Protein kinase domain profile. 358 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00889 654 Pfam Protein tyrosine and serine/threonine kinase 371 516 IPR001245 GO:0004672|GO:0006468
Trre15g00889 654 Gene3D Phosphorylase Kinase; domain 1 329 435 - -
Trre15g00889 654 Pfam Wall-associated receptor kinase galacturonan-binding 46 97 IPR025287 GO:0030247
Trre15g00889 654 SUPERFAMILY Protein kinase-like (PK-like) 341 614 IPR011009 -
Trre15g00889 654 Gene3D Transferase(Phosphotransferase) domain 1 437 527 - -
Trre15g00889 654 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 42 616 IPR045274 GO:0007166
Trre15g00889 654 Gene3D Transferase(Phosphotransferase) domain 1 528 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00889 Trre-Chr15 6685321 6688210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00889 2 613 Receptor kinase-like Gene Family AT2G23450 27.519 6.12e-53 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Trre15g00889 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00889 - - gmx:100810557 875.93