Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00844 ATGGAAAATCCCAAAATCTCAGCCTATTACCAGACGAGGTTAGCGCACTTCGGTGTCGTCAGTACAGAGTGGTTAGCTCAGGCTCAATCCGCAACAAAACCTCTTCCATCATCATCAACCGATTCAGACACTGATAAAGATACCAATTTCTCTGTAATTGATGAATTCAACCGGTGGCGTAATCATCCTGATTTGGCTGAAGCTGTTGCCGCAATTCGTGCCCTTGCTGCCGTTATCAGCTCTAGCAAAGCTTCTACTATGATGCAACTCGAAATTGAACTCAAAAATGCCTCTGATACTCTTAAAGCATGGGATACAACCTCTATCTCATTGACAGCGGCATCTGATCTGTTTATGAGATACGTGACAAGGACCTCTGCTTTGGAATTTGAAGACTTCAATTCTGCTAAATCTCGCTTGATTGAGCGTGCTGACAAGTTTGGGGAAATTTCCTACAAGGCTCGCAAAATTATTGCAATGCTTAGTCAAGATTTTATATTTGATGGTTGTACCATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTTCTTAAACTGGCTGCACATAATAAGAAACGCTTTCGGGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGTTTAAGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTGGTGATAGACTCTGCAGTGGCTTATACTATGGATGACGTAGACATGGTAATTGTGGGGGCAGACGGAGTTGTTGAAAGTGGTGGTATAATTAACATGATGGGGACATACCAAATTGCGTTGGTTGCAAAGAGTATGAATAAGCCAGTCTACGTGGCTGCCGAAAGCTACAAGTTTGCTCGTCATTACCCTCTGGACCAAAAGGATTTGGCGCCAGCTATACGACCAGTTGATTTTGGTGTACCTATTCCATCCAAGGTTGACGTTGAATGCTCTGCCCGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAGCTCATCCAGCTATACTTATAA 1050 0.4333 MENPKISAYYQTRLAHFGVVSTEWLAQAQSATKPLPSSSTDSDTDKDTNFSVIDEFNRWRNHPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDTLKAWDTTSISLTAASDLFMRYVTRTSALEFEDFNSAKSRLIERADKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAHNKKRFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDDVDMVIVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARHYPLDQKDLAPAIRPVDFGVPIPSKVDVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00844 349 Coils Coil 87 107 - -
Trre15g00844 349 Gene3D - 153 349 IPR042529 -
Trre15g00844 349 Gene3D - 47 150 IPR042528 -
Trre15g00844 349 FunFam Translation initiation factor eIF-2B subunit alpha 153 349 - -
Trre15g00844 349 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 18 349 - -
Trre15g00844 349 FunFam Translation initiation factor eIF-2B subunit alpha 48 150 - -
Trre15g00844 349 SUPERFAMILY NagB/RpiA/CoA transferase-like 65 348 IPR037171 -
Trre15g00844 349 Pfam Initiation factor 2 subunit family 63 337 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00844 Trre-Chr15 6245230 6248565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00844 2 349 Eukaryotic Initiation Factors Gene Family AT1G53880 78.933 0.0 548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00844 15 6245230 6248565 Trre15g00844 15 6245230 6248565 ECH