Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00836 ATGTCTTCATTTCCATCTCTCATTATTCTCTTCTTCATTTCCACCACCACACTCACATTTTCATTACCACAAACCAAACAAACCTTCATTATCCAAATCCAACACGAATCCAAACCGTCCATTTTCCCATCTCACAAAAACTGGTACGAATCCTCACTCTCTTCAATAACAGCATCCCCAAACACACTCATCCACACATACGACACCGTTTTTCATGGTTTCTCAGCAAAACTCACACAACAAGAAGCAACAAATCTTCAATCATTAAGCCACGTCATCACTATAATACCCGAACAGATTCGTACTCTTCACACAACTCGTTCACCTCAATTTCTCGGGTTAAAAACCGCCGACAGAACCGGGTTACTCCATGAAACTGATTTCGGGTCGGATCTTGTTATTGGAGTTATTGATACCGGAATCTGGCCGGAGAGACAGAGTTTTAACGACCGTGAGCTTGGTCCGGTTCCGTCGAAATGGAAAGGACAGTGTGTCGCCGGAAAAGATTTTCCGGCGGCGTCGTGTAATAGGAAGGTAATCGGAGCGAAGTACTTTTCCGGCGGGTATGAAGCTACTAACGGGAAGATGAATGAGACGAATGAGTATCGTTCGGCTAGAGATTCCGATGGACATGGAACTCACACTGCTTCAATCGCCGCCGGTAGGTATGTTTCTCCGGCGTCTACTTTAGGTTATGCTAAAGGTGTCGCCGCCGGTATGGCTCCTAAAGCTCGTTTAGCAGTTTATAAAGTTTGTTGGAACGGTGGTTGTTTTGATTCCGATATTCTCGCCGCCTTTGACGCCGCCGTGGCTGACGGTGTCGACGTTGTTTCTCTCAGTGTTGGTGGTGTTGTTGTGCCGTACCATCTCGATGTCATTGCTATTGGAGCTTTTGGTGCTTCTAATGCTGGAGTTTTTGTTTCTGCCTCCGCCGGTAACGGTGGTCCGGGAGGACTCACTGTTACCAATGTAGCTCCTTGGGTGGCAACTGTTGGTGCCGGGACAATTGACAGAGATTTTCCAGCTGATGTGAAGCTTGGAAATGGTAAGATTATACCTGGAGTTAGTATCTATGGTGGACCGGGTTTAACTCCGGGTCGGATGTACCAGATTGTGTATGCAGGTAGCAGCGGCGAACACAGTGGTGAAGGTGGTGATGGTTATTCATCTTCACTTTGTTTGGAAAATTCTTTGGATCCTAAGTTTGTAAAAGGAAAAATTGTTGTTTGTGATAGAGGTATTAATTCAAGAGGTGGTAAAGGTGAAGTAGTGAAAAAAGCAGGTGGAATTGGGATGATTTTGGCCAATGGTGTGTTTGATGGTGAAGGGTTAGTGGCCGATTGTCACGTGTTGCCTGCCACGGCAGTTGGTGCCATAGGCGGCGATGTAATTAGGAGTTACATTGCTGCACATAAGTCACTGTCGGTTGGGTCATTACCGACTGCGACTATTGTGTTTAAGGGAACTAGGCTTGGGGTTAGGCCAGCTCCTGTGGTGGCATCGTTTTCTGCTCGAGGGCCTAACCCTGAATCGCCTGAGATATTGAAACCAGATGTTATAGCACCTGGTTTAAACATTCTAGCTGCTTGGCCCGATCGAGTTGGACCTTCCGGGATTCCTTCTGATCATAGAAGAACTGAATTCAACATATTGTCCGGTACATCGATGGCTTGTCCTCATGTTTCGGGTTTAGCCGCTTTGTTGAAAGCAGCTCACCCTGATTGGAGTCCAGCTGCTATCAAATCAGCTCTTATGACCACCGCGTATACTGTCGACAACAAGGGCGATCCAATGTTGGATGAGTCTAACGGAAACATTTCATCGGTGTTTGATTATGGAGCTGGACATGTTCATCCAGAGAAAGCATTGGATCCTGGTTTGGTTTATGATATTTCAGTCTATGATTATGTTGATTTCTTGTGTAACTCAAATTACACCACCAAGAATATTAAAGTGATCACAAGAAAAATTGCAGATTGTAGTGGTGCCAAAAAAGCTGGTCATGCTGGTAACTTGAATTATCCAACATTATCTGCAGTTTTTCAACAATATGGTAAACATAAAATGTCTACACATTTTATTAGGACTGTAACCAATGTTGGTGACCCAAATTCAGTTTATAAAGTAACAATTAAACCACCTGAGGGAATGGTGGTAACTGTGAAGCCAGATATGTTATCTTTTAGAAGGGTTGGTCAGAAATTGAATTTTCTTGTTAGGGTACAAACTAGGGAAGTTAAGCTATCACCTGGAAGTTCTTTAGTGAAGAGTGGTTCCATAATTTGGTCTGATGGAAAACACATTGTCACAAGTCCTTTGGTTGTGACAATGCAGCAACCTCTTGATTAG 2349 0.4423 MSSFPSLIILFFISTTTLTFSLPQTKQTFIIQIQHESKPSIFPSHKNWYESSLSSITASPNTLIHTYDTVFHGFSAKLTQQEATNLQSLSHVITIIPEQIRTLHTTRSPQFLGLKTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRELGPVPSKWKGQCVAGKDFPAASCNRKVIGAKYFSGGYEATNGKMNETNEYRSARDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWNGGCFDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAIGAFGASNAGVFVSASAGNGGPGGLTVTNVAPWVATVGAGTIDRDFPADVKLGNGKIIPGVSIYGGPGLTPGRMYQIVYAGSSGEHSGEGGDGYSSSLCLENSLDPKFVKGKIVVCDRGINSRGGKGEVVKKAGGIGMILANGVFDGEGLVADCHVLPATAVGAIGGDVIRSYIAAHKSLSVGSLPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGIPSDHRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDPMLDESNGNISSVFDYGAGHVHPEKALDPGLVYDISVYDYVDFLCNSNYTTKNIKVITRKIADCSGAKKAGHAGNLNYPTLSAVFQQYGKHKMSTHFIRTVTNVGDPNSVYKVTIKPPEGMVVTVKPDMLSFRRVGQKLNFLVRVQTREVKLSPGSSLVKSGSIIWSDGKHIVTSPLVVTMQQPLD 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00836 782 ProSiteProfiles Serine proteases, subtilase domain profile. 108 623 - -
Trre15g00836 782 FunFam Subtilisin-like protease SBT1.9 18 104 - -
Trre15g00836 782 CDD Peptidases_S8_3 102 589 IPR034197 -
Trre15g00836 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 775 IPR045051 -
Trre15g00836 782 FunFam subtilisin-like protease SBT1.5 337 491 - -
Trre15g00836 782 FunFam Subtilisin-like protease SBT1.5 131 347 - -
Trre15g00836 782 SUPERFAMILY Subtilisin-like 103 627 IPR036852 GO:0004252|GO:0006508
Trre15g00836 782 Gene3D Peptidase S8/S53 domain 131 636 IPR036852 GO:0004252|GO:0006508
Trre15g00836 782 Gene3D - 640 778 - -
Trre15g00836 782 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Trre15g00836 782 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Trre15g00836 782 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Trre15g00836 782 Pfam Peptidase inhibitor I9 28 104 IPR010259 -
Trre15g00836 782 Pfam Subtilase family 129 604 IPR000209 GO:0006508|GO:0008236
Trre15g00836 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 104 IPR037045 -
Trre15g00836 782 Pfam PA domain 385 457 IPR003137 -
Trre15g00836 782 Pfam Fibronectin type-III domain 671 775 IPR041469 -
Trre15g00836 782 SUPERFAMILY Protease propeptides/inhibitors 27 102 - -
Trre15g00836 782 SUPERFAMILY PA domain 401 484 IPR046450 -
Trre15g00836 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Trre15g00836 782 CDD PA_subtilisin_like 343 484 - -
Trre15g00836 782 Gene3D - 337 492 - -
Trre15g00836 782 FunFam Subtilisin-like protease SBT1.5 640 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00836 Trre-Chr15 6183776 6186124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00836 28 781 Subtilisin-like Serine Gene Family AT3G14240 76.658 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00836 - - gmx:100808511 1279.62