Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00824 ATGGGAGGGTTAGTGATATTGATATGCATGGTTGTTTCATGGATATTCATACATAGATGGAATCAAAGGAACAAAAAAGGTCCCAAAACTTGGCCCTTTCTTGGAGCTGCCATTGAACAATTGATGAACTATGATAGAATGCATGATTGGCTTGTTCAATATTTTTCCATGTCCAAAACTGTTGTGGTCCCCATGCCATTCACAACTTATACTTACATTGCTGATCCTATTAATGTGGAACATGTACTTAAGACAAACTTCAATAATTATCCAAAGGGTGAAGTGTACCATTCATATATGGAAGTATTACTTGGACATGGAATATTTAATGTTGATGGAGAACTTTGGAAGAAACAAAGGAAAACTGCTAGCTTAGAATTTGCATCAAGAAATTTGAGGGATTTTAGCACCAAAGTTTTCAAAGAATATGCTTTAAAACTCTCATCCATTCTCAATCAAGCATCTTTTCTCAACCAACAAATAGACATGCAGGAGTTATTGATGAGAATGACTTTAGACTCCATATGCAAAGTTGGTTTTGGAGTGGAAATTGGAACTTTGAATCCTAACTCACCAAACAATTCTTTTGCTAAAGCTTTTGATACTGCTAATATTATTGTAACACTTCGTTTCATTGATCCTTTATGGAAAATTAAGAAAATTTTAAATCTTGGCTCAGAAGCACAACTTGACAAGAGCATCAAAATCATTGATGATTTTACTTACTCAGTTATTAGAACAAGAAAGGCAGAGATTGAGGATGCTAAAAAGAATGGCCAACAAAATAAGATAAAAAATGATATATTATCAAGATTCATAGAATTAGGAGAAGACAATGCAAGTGACAAAAGTTTAAGAGATGTTGTTTTGAACTTTGTGATTGCTGGTAGAGACACAACTGCAACAACTCTATCATGGGCTATATATATGGTCATGACACATTCTCATGTTGCTGAAAAACTTTACTTAGAGCTCAAAACTTTTGAGGAAAATCAAGCAAAAGAAGAAAATGTTACATTGCCTCAATGTGATGACAATGATGACCCTGAATTGTTCAATCAAAGAGTAATACAATTTTCAAAGCTATTGAATAAAGATTCATTAGAGAGACTTCATTATTTGCATGCAGTCATAACTGAGACCTTAAGATTGTATCCAGCAGTTCCTCAGGACCCCAAGGGTGTGATGGAAGATGATGTGTTACCAGATGGTACAAAAATAAAAGCAGGGGGTATGGTGACTTATGTGCCATATTCCATGGGAAGGATGGAGTATAATTGGGGCCCTAATGCTGCTTCATTTATACCTGAAAGATGGTTTAAGGATGGTGTTCTTAAAAATGAATCTCCATTCAAATTCACAGCTTTTCAGGCAGGGCCAAGGATATGTCTTGGTAAGGACTCTGCATATCTTCAAATGAGAATGGTGTTGGCAATTTTGTGCAGATTTTACAAATTCAATTTGGTGCCTGGTCATCCAGTGAAGTACAGAATGATGACTATTTTATCAATGGCACATGGCTTGAAGCTTACCATAGAGAAACGTTCTTGA 1551 0.3533 MGGLVILICMVVSWIFIHRWNQRNKKGPKTWPFLGAAIEQLMNYDRMHDWLVQYFSMSKTVVVPMPFTTYTYIADPINVEHVLKTNFNNYPKGEVYHSYMEVLLGHGIFNVDGELWKKQRKTASLEFASRNLRDFSTKVFKEYALKLSSILNQASFLNQQIDMQELLMRMTLDSICKVGFGVEIGTLNPNSPNNSFAKAFDTANIIVTLRFIDPLWKIKKILNLGSEAQLDKSIKIIDDFTYSVIRTRKAEIEDAKKNGQQNKIKNDILSRFIELGEDNASDKSLRDVVLNFVIAGRDTTATTLSWAIYMVMTHSHVAEKLYLELKTFEENQAKEENVTLPQCDDNDDPELFNQRVIQFSKLLNKDSLERLHYLHAVITETLRLYPAVPQDPKGVMEDDVLPDGTKIKAGGMVTYVPYSMGRMEYNWGPNAASFIPERWFKDGVLKNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFNLVPGHPVKYRMMTILSMAHGLKLTIEKRS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00824 516 FunFam Alkane hydroxylase MAH1 21 516 - -
Trre15g00824 516 CDD CYP86A 59 508 - -
Trre15g00824 516 SUPERFAMILY Cytochrome P450 17 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 Gene3D Cytochrome P450 12 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 PANTHER CYTOCHROME P450 15 508 - -
Trre15g00824 516 Pfam Cytochrome P450 27 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00824 516 Pfam Cytochrome P450 354 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00824 Trre-Chr15 6086676 6090670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00824 1 516 Cytochrome P450 AT1G69500 74.667 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00824 K20495 - gmx:100787802 936.406