Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g00823 | ATGGCCAAACTTGGAAAATTAACAAAACTAAAATCAGCTATCAAAAGATGGCCATCATTAACAAAACTAAGCCGCAACAACAGCTCTGTCTCTGCCTCATGCAAGAACCAGGAACAAGAACAAGAACAAGACCTTCATGCTGTCTACGTTGGAAAGTCGCGCCGGCGTTACCTAGTAAACTCTGAAGTTATTCAACACCCTGTTTTTCAGGAGCTAGTTGACAAGTCATGTTGTAATGGTGGTTGTGATGATGGTGTTTTAGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTGTTATGGATGCTTGAAAGTGCTGAAAGTGAGACAGCACAATTAGGGTCAATGGATGAGTTAGTTGAGTTCTACAATTGTGCATGTTGA | 384 | 0.401 | MAKLGKLTKLKSAIKRWPSLTKLSRNNSSVSASCKNQEQEQEQDLHAVYVGKSRRRYLVNSEVIQHPVFQELVDKSCCNGGCDDGVLVVSCEVVLFEHLLWMLESAESETAQLGSMDELVEFYNCAC | 127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g00823 | 127 | Pfam | Auxin responsive protein | 15 | 103 | IPR003676 | GO:0009733 | |
Trre15g00823 | 127 | PANTHER | EXPRESSED PROTEIN | 15 | 124 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g00823 | Trre-Chr15 | 6080955 | 6081338 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g00823 | 3 | 111 | Calmodulin-binding Proteins | AT4G34750 | 27.928 | 3.71e-09 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g00823 | - | - | gmx:100797158 | 189.504 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Trre15g00823 | 15 | 6080955 | 6081338 | Trre15g00823 | 15 | 6080955 | 6081338 | ECH |