Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00823 ATGGCCAAACTTGGAAAATTAACAAAACTAAAATCAGCTATCAAAAGATGGCCATCATTAACAAAACTAAGCCGCAACAACAGCTCTGTCTCTGCCTCATGCAAGAACCAGGAACAAGAACAAGAACAAGACCTTCATGCTGTCTACGTTGGAAAGTCGCGCCGGCGTTACCTAGTAAACTCTGAAGTTATTCAACACCCTGTTTTTCAGGAGCTAGTTGACAAGTCATGTTGTAATGGTGGTTGTGATGATGGTGTTTTAGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTGTTATGGATGCTTGAAAGTGCTGAAAGTGAGACAGCACAATTAGGGTCAATGGATGAGTTAGTTGAGTTCTACAATTGTGCATGTTGA 384 0.401 MAKLGKLTKLKSAIKRWPSLTKLSRNNSSVSASCKNQEQEQEQDLHAVYVGKSRRRYLVNSEVIQHPVFQELVDKSCCNGGCDDGVLVVSCEVVLFEHLLWMLESAESETAQLGSMDELVEFYNCAC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00823 127 Pfam Auxin responsive protein 15 103 IPR003676 GO:0009733
Trre15g00823 127 PANTHER EXPRESSED PROTEIN 15 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00823 Trre-Chr15 6080955 6081338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00823 3 111 Calmodulin-binding Proteins AT4G34750 27.928 3.71e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00823 - - gmx:100797158 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00823 15 6080955 6081338 Trre15g00823 15 6080955 6081338 ECH