Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00822 ATGGGAGCTAGAGAAAGCAAGTTAAGGAAATGGTTTAGTGGTGGAAGTGGTCACTACAAACGTATACAAGGTCCTATGTTGTTGGCACCAAAAGGCTATGTTCCAATATGTGTTGGAACAAATGAAGACACTGGTAGGAGATTTATGGTTCACACAAGAGCACTTGGTGATGCATTTTTTTGTGAATTGTTGGGTAAGGCTGAGGAGGTATATGGGTTTAGTAATGAAGGGGTTTTGAGGATTCCATTTGAAGCACAAGATTTTGAGGAGAGGTTTATTGGAAGGTCCAACACAAAGATTAAAATTAAGAGAATGGTAATACCAACTTGA 330 0.3909 MGARESKLRKWFSGGSGHYKRIQGPMLLAPKGYVPICVGTNEDTGRRFMVHTRALGDAFFCELLGKAEEVYGFSNEGVLRIPFEAQDFEERFIGRSNTKIKIKRMVIPT 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00822 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 90 IPR003676 GO:0009733
Trre15g00822 109 Pfam Auxin responsive protein 29 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00822 Trre-Chr15 6074730 6075059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00822 25 90 Calmodulin-binding Proteins AT4G34750 40.909 1.29e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00822 K14488 - gmx:102666083 144.821