Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00812 ATGGAACTCTTGTTCTCACATGAATCACTCTTCATCTTCATCCTCTCCCTTATCTTCCTCTATCTCTTCTTCTTTCACTTCTTCACCACATCAAAAAAACACCATGGCTTCAAAATCTACCCTCTACTTGGAGCCTTACCTGAATTCATACTAAACCGCCACCGCTTCCTTGACTGGACAACTCAAATCCTCCGTAACTGTCCAACCAACACCGCCGTCTTCATCCGTCCCGGCAAAATCCACGGCATAATAACAGCCAATCCAGATAACATCCAACACATTCTCAAAACAAAATTCGAAAACTATCCAAAAGGCGAAAGATTCATCAGCCTCCTTCATGATTTTCTCGGTAATGGTATCTTCAACTCCGACGGTGATCTCTGGAAACTTCAGAGGAAAACCGCCAGCTACGAATTCAACACAAAATCGCTACGAAATTTCATCGTCGAAAATGTAACCGTCGAAACACAAACCAGACTCATTCCAATTCTCTCAAAAGCAACGGAAAACAACCAGATTCTTGATTTGCAGAATCTTTTAGAACGGTTTGCATTCGATAACGTTTGTAAACTAGCTTTTAACGTCGATCCTGATTGTCTCGGCGGTGATGTTACCGCCGGAGCAGCCTTCATGCACGCGTTTGAAGACGCTGCAATGATAAGTTCTGGAAGGTTCATGTGTCTTCTACCATTGTTATGGAAAATGAAAAAATATCTTAACGTTGGAACAGAACGGAGATTGAAACAATCAATCTCAACCGTTCATGAGTTTGCTGATGAGATTATACGGTCGAGAATGGAAGCTAAAGAGGCTGGTGGTCAAGATTTGTTATCTCGTTTCATTGAAACAGAAGAAGCTTCACCGGAGTTTCTTCGCGATATTGTAATAAGTTTTATTCTCGCTGGGCGCGATACTACATCGTCCGCTTTGAGTTGGTTTTTCTGGATTTTATCTTCAAAACATGACATTAAAGATAAAATAATAGAAGAAATTGAAATGGTGCGTTTAAAAAGTGGAGATAAAACGGCTTCGTTTGGATATGAAGAGCTGAAAGAGATGCATTACTTGCACGCGGCGATTAGTGAGACAATGAGGTTGTATCCGCCTGTACCGGTTGATACTAAGGCGTGTTTGAATGACGATGTTTTGCCGGATGGAACTAGGATAAAGAAAGATTGGTTTATTTCTTATCATACTTATGCTATGGGGAGAATGGAGAGTGTGTGGGGGAAAGATTGTAATGAGTTTAAACCGGAGAGGTGGTTGGAAAAGGATAAGGATGGTGTCAGTGTGTGTAGAAGTGAGAGTCTGTATCGGTTTCCGGTGTTTCATGCAGGTCCTAGGATGTGTTTAGGGAAAGAAATGGCTTATATTCAGATGAAGTCTATTGCAGCTTCTGTTATGGAAAGGTTTGAGGTTGTTGCATTGGATAAAGATACTTGTCCACAACATGTTTTGTCTCTGACTTTGAGGATGAAAAATGGGTTGCCTGTGAATGTAAAGAGATCAGTAAGGTAG 1518 0.4117 MELLFSHESLFIFILSLIFLYLFFFHFFTTSKKHHGFKIYPLLGALPEFILNRHRFLDWTTQILRNCPTNTAVFIRPGKIHGIITANPDNIQHILKTKFENYPKGERFISLLHDFLGNGIFNSDGDLWKLQRKTASYEFNTKSLRNFIVENVTVETQTRLIPILSKATENNQILDLQNLLERFAFDNVCKLAFNVDPDCLGGDVTAGAAFMHAFEDAAMISSGRFMCLLPLLWKMKKYLNVGTERRLKQSISTVHEFADEIIRSRMEAKEAGGQDLLSRFIETEEASPEFLRDIVISFILAGRDTTSSALSWFFWILSSKHDIKDKIIEEIEMVRLKSGDKTASFGYEELKEMHYLHAAISETMRLYPPVPVDTKACLNDDVLPDGTRIKKDWFISYHTYAMGRMESVWGKDCNEFKPERWLEKDKDGVSVCRSESLYRFPVFHAGPRMCLGKEMAYIQMKSIAASVMERFEVVALDKDTCPQHVLSLTLRMKNGLPVNVKRSVR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00812 505 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PANTHER CYTOCHROME P450 26 498 - -
Trre15g00812 505 Pfam Cytochrome P450 39 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 Gene3D Cytochrome P450 18 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 CDD CYP86A 71 496 - -
Trre15g00812 505 FunFam Cytochrome P450 28 505 - -
Trre15g00812 505 SUPERFAMILY Cytochrome P450 25 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Trre15g00812 505 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00812 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00812 Trre-Chr15 5990510 5992027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00812 30 501 Cytochrome P450 AT3G56630 60.924 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00812 - - gmx:100812147 722.62