Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00805 ATGGCTTTGGAAATAGAAGAAGAAGCAGTACTAGTTGTTGTGAACATGGAGAACGTACAACAACAAGAACATGTTTCTGATCATCAACTTTCGTTACCAAAGTTTGGAAGAAGCAATAGTAATGGAGAAAGTACAACAACAAGAACATGTTTGGAAGAAAAAGCTTTAAAAATACAAGAAGAAGCAGTATTAGTTGTGAATGTGGAGAACGTACAGCAAGAAGAAAATGTTTCCGATCATCCTAGAATCCAAGGGCAGAAACAACTTTCTTTACCAAAGTTTGAAAGAAACGATTCTCTTGAAATAGAATCTCGCACCACCTCCCACTCTCATCACTCTAAAGGGCCATCAACAGTGATAATACTACAGTTGGCATTTCAAAGTCTCGGAATAGTTTATGGAGACATTGGAACTTCGCCGCTGTATGTATTTTCAAGCACTTTCACCGACGGTATAAAGCACAATGATGATATATTGGGAGTTCTTTCATTAATCTTATACACCCTCACTCTCATCCCTCTTCTCAAATATGTCTTCCTCGTCCTTAGGGCCACTGATAATGGTGATGGTGGAACATTTGCTCTCTACTCTTTGATATGTCGTTATGCAAGAGTTGGATTAATTCCAAATCAAGAAGCAGAGGATGCAGTTGTGTCCAATTATCAACTGCAATTGCCAAACAACCGTGAGAAGAGAGCATCAAAGGTTATATCTATGCTTGAGAAAAGTTATTTTATGAAGCTCTTTCTCTTATTTGCTACTATGCTTGGCACTTCCATGGTGATTGGTGATGGTGTTCTCACCCCTTGCATCTCTGTTTTATCAGCTGTGGGAGGGATCAAGCCAGCTGCAAACCATATAACAGAAAATCACATTGTTTTGATATCAGTAGGAATCTTGATCGGCCTTTTCATGGTTCAGCGGTTTGGAACTGATAAAGTGGGTTACTGTTTTGCTCCCATAATCTGTATATGGTTTGCATTGCTCGGAGGTATTGGCATGTACAATTTCATCAAACATGATACATCAGTTGTAAAAGCAATAAATCCAAAATACATAGTAGATTATTTCACAAGGAATAAGAAAGATGCTTGGATTTCTCTCGGCGGTGTTGTTCTGGCTATAACAGGAACTGAAGCACTATTTGCGGATGTTGGACATTTCACGGTTCGGTCTATACAGATAAGTATGTGTTATGTGACTTATCCTGCTCTCCTATTGTCTTATGCTGGTCAAGCTTCCTTTCTTCGCAAAAACAACAATCTTGTCAGTGACACATTTTATAAGTCCATACCAGACTCTTTATATTGGCCAGTGTTTGTGATTGCTGTTTTGGCAGCAATAATAGCTTCTCAAGCTATGATATCAGGGACATTCTCTATAATCCAACAGTCCCTATCATTAGGATGTTTCCCTCGAGTGCGAATTGTACATACATCAGCCAAATATGAAGGACAAGTTTATATCCCAGAAGTTAATTACATCCTCATGGTTGCTTGTATTGCTATCACTGTTGGCTTCAAAACCACAACAAAAATTGGCAATGCCTACGGGATAGCAGTGGTATTTGTGATGACAATGACATCGGCTTTTCTCGTACTAATCATGATAATGATATGGAAGACTCACATACTTTTGATCCTTACCTATGTTCTTGTGATTGGTTCAGTAGAGCTTGTTTATTTAAGCTCAGTTTTATACAAATTTGACCAAGGAGGTTATCTACCTCTTGCATTTGCTGCAATTCTAATGTTCGTCATGTATGTTTGGAATAATGTGCATAGAAGGAAATACTATTATGAACTTGATCACAAGATTTCCCCGGAGAATGTTAGAGAGATTGCTTGTGACACAAATTTGTGTCGATTACCCGGTCTTGCACTGTTTTACTCTGAGCTAGTTCAAGGTATTCCACCTATTTTCAAGCATTATGTTGCAAATGTTCCTGCACTACACTCTGTCCTTGTCTTTGTTACCATCAAATCCTTACCTGTTAGCAAAGTTCCAATAGAAGAAAGGTTCCGTTTTCGTCGAGTACAACCTAAAGAACTCAATGTATACCGATGCGTTGTTAGATATGGATACACTGATGTACGCAATGAGCAAGAGCCTTTTGAGAAGATTTTGGTTGAGAGGTTGAAGGAGTTTATAGTTAAGGAATATTATTTGTCTCAAAAAGTGATACAAGATGGTAAAAATGACAAAAGTGACGACGATGATAAGGTTGATGAAATTAGTGATGGAGAAGAAAGAGTACAAGAGGCAATTGAAAAAGAGATTGAGGCTGTTGAAAATGCATCAAGGGCTGGTGTTGTTCATTTGGTTGGTGAAAATGAGGTGATTGCGAGTAAAGGAGCTGGCATTGCTCAGAGGATTTTGATTGATTATGCTTACAATTTCTTGAAGAAATTTTTTAGACAAAGTGAAAAGGCCATGATCGATCCTGATCCAGTCAAGAGGCCTTCTGCCAGAGAGTTGGTAGAGAACCCAATTTTCGAGAGGGCCTTAAGAACAGCAACAAATTGA 2526 0.3848 MALEIEEEAVLVVVNMENVQQQEHVSDHQLSLPKFGRSNSNGESTTTRTCLEEKALKIQEEAVLVVNVENVQQEENVSDHPRIQGQKQLSLPKFERNDSLEIESRTTSHSHHSKGPSTVIILQLAFQSLGIVYGDIGTSPLYVFSSTFTDGIKHNDDILGVLSLILYTLTLIPLLKYVFLVLRATDNGDGGTFALYSLICRYARVGLIPNQEAEDAVVSNYQLQLPNNREKRASKVISMLEKSYFMKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKPAANHITENHIVLISVGILIGLFMVQRFGTDKVGYCFAPIICIWFALLGGIGMYNFIKHDTSVVKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSIQISMCYVTYPALLLSYAGQASFLRKNNNLVSDTFYKSIPDSLYWPVFVIAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVRIVHTSAKYEGQVYIPEVNYILMVACIAITVGFKTTTKIGNAYGIAVVFVMTMTSAFLVLIMIMIWKTHILLILTYVLVIGSVELVYLSSVLYKFDQGGYLPLAFAAILMFVMYVWNNVHRRKYYYELDHKISPENVREIACDTNLCRLPGLALFYSELVQGIPPIFKHYVANVPALHSVLVFVTIKSLPVSKVPIEERFRFRRVQPKELNVYRCVVRYGYTDVRNEQEPFEKILVERLKEFIVKEYYLSQKVIQDGKNDKSDDDDKVDEISDGEERVQEAIEKEIEAVENASRAGVVHLVGENEVIASKGAGIAQRILIDYAYNFLKKFFRQSEKAMIDPDPVKRPSARELVENPIFERALRTATN 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00805 841 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 112 812 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre15g00805 841 Pfam K+ potassium transporter 125 697 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre15g00805 841 Coils Coil 749 769 - -
Trre15g00805 841 MobiDBLite consensus disorder prediction 24 46 - -
Trre15g00805 841 NCBIfam potassium uptake protein 124 811 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00805 Trre-Chr15 5952419 5956862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00805 75 815 Inorganic Solute Cotransporters AT4G13420 53.133 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00805 K03549 - csin:114286317 1064.68