Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00791 ATGGCCATAGTAGCTCCTGCAATTTTTCATCCAAAATTCTTCATCTTGATTTTCAACATCATCATAAATTTTTCTATGACATGTTCAATGTCAGAAGCAGAAGCTTTATTGAGTCTAAAAAACTCATTTTCAAATTCAGAAGCACTTGATAATTGGATTGCCAACACTTTTCCTTGTACCGAAGACGATCAATGGGCAGGCGTTGTTTGTTACAACGGTTTAGTAACCGGTCTGCGTCTCGGTGGAATGGGACTATTTGGAAAAATTAATGTTGATGCATTGCTTGAACTTAAAGGTTTAAGAACTATTAGTCTTATGAATAATTCTTTCACCGGTTCGATTCCAGAATTGAATCGAATCGGTTTCTTGAAAGCGATGTATTTATCAGGAAACAAATTTTCGGGAAATATTCCTCAGGAATATTTCCAAAGAATGAAATCATTGAAAAAAGTTTGGTTATCAAATAATGAATTCACAGGTGTTATTCCATCATCATTAGCTGAGGTTCCTCAACTTGTTGAATTACATCTTGAAAATAATCAGTTTAGTGGTAATATTCCAAATTTCAATAGTCCTTCATTGAGGAAAATTGATGTTTCAAACAACAATTTAGAAGGTGAAGTTCCTGAAGGTTTGATGAGATTTAATCAAAGTTCTTTTCAAGGGAATTCGGGTTTATGCGGCGAGAAAATCGGTACAATATGTGGAAAACCAATGGAACAACCAAATCCTATTGGAGCACATAATATGAATAATATGACAGAACTTAAGAACAATAATGATAATGTTTATGTGAGTATGGCTGATAAAAGTAAGCATAGGTCATTGCAGATTATTGGTATTGTTATAACAAGTATAGTACTAATTTCACTTGCAATATTTTTGATTATGAAATCAAGGAAAAAAAAAGAGAAAGTTGAATATGATGATGAAATTGGTGAGAATAATGGACAAGAGAGTATTAATGATATTGGAAGTGTTGAAGTTCAAGTAACTAGTAGTAGTAATAGTATTAGTACTAGTACTAATCATGTGAAAAAATCACCATCTAGTAGAAAAAATTCTTCTCATGGTAGTAAAGGGATGGGAGAGCTTATGATGATGAATGATGATAAGGGTGTGTTTGGTTTACCTGATTTGATGAAAGCTTCTGCAGAAGTGCTTGGAAATGGAGGGTTTGGATCATCTTATAAAGCTGTTATGTCTAATGGTTTGGCTGTGGTTGTGAAAAGAACTAGAGAGTTAAATGGTTTAGGAAAAGATGGTTTTGAAGCTGAGATGAAAAGGCTTGGAAGGGTTAAACATTGGAATGTTTTGACTCCTTTGGCTTATCATTATAGAAAGGATGAGAAATTAGTCATTTCTGAGTATGTTCCAAGAGGAAGTCTACTCTATTTGCTTCATGGTGATAGAGGACCATCACATGCAGAACTAGATTGGAACACACGTTTAAAGATTGTACAAGGAATTGCAAAAGGAATGCATTATCTTCACACAGAACTTGCTTCTTCTGATCTACCACATGGAAATTTAAAATCAAGCAATGTTCTACTTGGACCAGATTATGAACCATTTCTCATGGACTTTGGTTTCATTAATCTAGTTAACTCTTCAAGTTATGCACAAACATTATTTGCTTATAAAGCTCCAGAAGCATTACAACATAACAAAGTTTCGCCTCGTTGCGACGTATACTGTCTCGGCGTAGTCATACTCGAAATACTAACCGGAAAATTTCCATCACAGTATCTTAACAACGGTAAAGGCGGAACGGATGTAGTACAATGGGTAGCATCAGCAATTTGTGAAGGAAGAGAAGTTGAATTACTTGATCCTGAAATTGCAAGTAATAAAAAATCATTAAGTGAAATGCAACAACTTATTCATATTGGTGCTGCTTGTACTGAAAGTAATCCTAAAAAGAGATTAGATATGTTTGAAGCAATTAGAAGAATAGAAGGTATTAAAACAAAAGGTGTACATTTTCAAGATCAAGTTCAAGAATCAAGAACAATAGAGGTTTTACCATCACTTAGAGATGGTTTTGGAGATTCTTCTCAAGCATATGATAATCAAGGACATTTTGGTGATGAATCAAGAAGAAGACATGGAACAAGTAGTATTGGAAATAAGGATAATATTGAATTTGGTGTAGCCTAA 2160 0.3389 MAIVAPAIFHPKFFILIFNIIINFSMTCSMSEAEALLSLKNSFSNSEALDNWIANTFPCTEDDQWAGVVCYNGLVTGLRLGGMGLFGKINVDALLELKGLRTISLMNNSFTGSIPELNRIGFLKAMYLSGNKFSGNIPQEYFQRMKSLKKVWLSNNEFTGVIPSSLAEVPQLVELHLENNQFSGNIPNFNSPSLRKIDVSNNNLEGEVPEGLMRFNQSSFQGNSGLCGEKIGTICGKPMEQPNPIGAHNMNNMTELKNNNDNVYVSMADKSKHRSLQIIGIVITSIVLISLAIFLIMKSRKKKEKVEYDDEIGENNGQESINDIGSVEVQVTSSSNSISTSTNHVKKSPSSRKNSSHGSKGMGELMMMNDDKGVFGLPDLMKASAEVLGNGGFGSSYKAVMSNGLAVVVKRTRELNGLGKDGFEAEMKRLGRVKHWNVLTPLAYHYRKDEKLVISEYVPRGSLLYLLHGDRGPSHAELDWNTRLKIVQGIAKGMHYLHTELASSDLPHGNLKSSNVLLGPDYEPFLMDFGFINLVNSSSYAQTLFAYKAPEALQHNKVSPRCDVYCLGVVILEILTGKFPSQYLNNGKGGTDVVQWVASAICEGREVELLDPEIASNKKSLSEMQQLIHIGAACTESNPKKRLDMFEAIRRIEGIKTKGVHFQDQVQESRTIEVLPSLRDGFGDSSQAYDNQGHFGDESRRRHGTSSIGNKDNIEFGVA 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00791 719 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Trre15g00791 719 MobiDBLite consensus disorder prediction 332 358 - -
Trre15g00791 719 MobiDBLite consensus disorder prediction 332 363 - -
Trre15g00791 719 Gene3D Ribonuclease Inhibitor 193 229 IPR032675 -
Trre15g00791 719 Pfam Protein kinase domain 386 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00791 719 SUPERFAMILY L domain-like 27 215 - -
Trre15g00791 719 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Trre15g00791 719 FunFam Nuclear pore complex protein NUP107 29 188 - -
Trre15g00791 719 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 657 IPR046959 -
Trre15g00791 719 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Trre15g00791 719 Gene3D Phosphorylase Kinase; domain 1 350 457 - -
Trre15g00791 719 MobiDBLite consensus disorder prediction 694 708 - -
Trre15g00791 719 ProSiteProfiles Protein kinase domain profile. 382 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00791 719 MobiDBLite consensus disorder prediction 686 719 - -
Trre15g00791 719 Gene3D Transferase(Phosphotransferase) domain 1 458 675 - -
Trre15g00791 719 SUPERFAMILY Protein kinase-like (PK-like) 386 652 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00791 Trre-Chr15 5847453 5850273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00791 20 655 Receptor kinase-like Gene Family AT3G42880 46.483 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre15g00791 Pkinase 8.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00791 - - tpra:123886727 1298.11